Job Description P0AFB5 Confidence 96.20% Date Thu Jan 5 11:25:49 GMT 2012 Rank 118 Aligned Residues 93 % Identity 19% Template c1qzrA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:dna topoisomerase ii; PDBTitle: crystal structure of the atpase region of saccharomyces cerevisiae2 topoisomerase ii bound to icrf-187 (dexrazoxane) Resolution 1.90 Å

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		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.			.	.	.	260	.	.	.	.	.	.		.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.									.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																					.	.											.																														.	.	.	.	.	.	.	.
Query SS confidence																					.	.											.																														.	.	.	.	.	.	.	.
Query Sequence		I	E	Q	V	L	L	N	I	V	R	N	A	L	Q	A	L	G	P	E	.	.	G	G	E	I	I	L	R	T	R	T	.	A	F	Q	L	T	L	H	G	E	R	Y	R	L	A	A	R	I	D	V	E	D	N	G	P	G	I	P	P	H	.	.	.	.	.	.	.	.	L	Q	D	T	L	F	Y	P	M	V	S
Query Conservation																					.	.											.																														.	.	.	.	.	.	.	.
Alig confidence																					.	.											.				.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	F	K	I	F	D	E	I	L	V	N	A	A	D	N	K	V	R	D	P	S	M	K	R	I	D	V	N	I	H	A	E	E	H	T	.	.	.	.	.	.	.	.	.	.	.	.	.	I	E	V	K	N	D	G	K	G	I	P	I	E	I	H	N	K	E	N	I	Y	I	P	E	M	I	F	G	H	L	L	T
Template Known Secondary structure																					T	T										T	T	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.							S	S					S	B		T	T	T		S	B								S	S	S
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.														.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		307	.	.											310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.
Query Sequence		G	R	E	.	.	.	.	.	.	.	.	.	.	G	G	T	G	L	G	L	S	I	A	R	N	L	I	D	Q	H	S	G	K	I	E	F	T	S	W	P	G	H	T	E	F	S	V	Y	L
Query Conservation					.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation																																.	.
Template Sequence		S	S	N	Y	D	D	D	E	K	K	V	T	G	G	R	N	G	Y	G	A	K	L	C	N	I	F	S	T	E	F	.	.	I	L	E	T	A	D	L	N	V	G	Q	K	Y	V	Q	K	W
Template Known Secondary structure			S				T	T	S					S			S	S									T					.	.							T	T	T	T
Template Predicted Secondary structure																																.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.			.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions