Job Description P0AFB5 Confidence 99.97% Date Thu Jan 5 11:25:49 GMT 2012 Rank 7 Aligned Residues 193 % Identity 16% Template c1gjvA_ PDB info PDB header:transferase Chain: A: PDB Molecule:[3-methyl-2-oxobutanoate dehydrogenase PDBTitle: branched-chain alpha-ketoacid dehydrogenase kinase (bck)2 complxed with atp-gamma-s Resolution 2.7 Å

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		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.							.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.				.	.	220
Predicted Secondary structure																																														.	.	.	.	.	.																									.	.	.
Query SS confidence																																														.	.	.	.	.	.																									.	.	.
Query Sequence		G	A	A	Q	L	L	S	K	A	L	P	D	P	S	L	L	E	Y	T	K	V	I	I	E	Q	A	D	R	L	R	N	L	V	D	R	L	L	G	P	Q	L	P	G	T	.	.	.	.	.	.	R	V	T	E	S	I	H	K	V	A	E	R	V	V	T	L	V	S	M	E	L	P	D	N	.	.	.	V	R	L
Query Conservation																																														.	.	.	.	.	.																									.	.	.
Alig confidence																																														.	.	.	.	.	.																									.	.	.
Template Conservation
Template Sequence		G	L	R	E	S	R	K	H	I	E	D	E	K	L	V	R	Y	F	L	D	K	T	L	T	S	R	L	G	I	R	M	L	A	T	H	H	L	A	L	H	E	D	K	P	D	F	V	G	I	I	C	T	R	L	S	P	K	K	I	I	E	K	W	V	D	F	A	R	R	L	C	E	H	K	Y	G	N	A	P	R
Template Known Secondary structure							T	T	T	S	S																													T	T	S			T	T			T	T																											S
Template Predicted Secondary structure
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	D	Y	D	P	S	L	P	E	L	A	H	D	P	D	Q	I	E	Q	V	L	L	N	I	V	R	N	A	L	Q	A	L	G	P	E	G	G	E	I	I	L	R	T	R	T	A	F	Q	L	T	L	H	G	E	R	Y	R	L	A	A	R	I	D	V	E	D	N	G	P	G	I	P	P	H	L	Q	D	T	L
Query Conservation
Alig confidence																																									.	.	.
Template Conservation																																									.	.	.
Template Sequence		V	R	I	N	G	H	V	A	A	R	F	P	F	I	P	M	P	L	D	Y	I	L	P	E	L	L	K	N	A	M	R	A	T	M	E	S	H	L	D	.	.	.	T	P	Y	N	V	P	D	V	V	I	T	I	A	N	N	D	V	D	L	I	I	R	I	S	D	R	G	G	G	I	A	H	K	D	L	D	R	V
Template Known Secondary structure							S	T	T																												T		T	T	.	.	.		T	T	S												S	S										S					G	G	G	T	T	T	T
Template Predicted Secondary structure																																									.	.	.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260				.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.		.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		F	Y	P	M	V	S	G	R	E	G	G	T	G	L	G	L	S	I	A	R	N	L	I	D	Q	H	S	G	K	I	E	F	T	S	W	P	G	.	H	T	E	F	S	V	Y	L	P	I
Query Conservation																																							.
Alig confidence										.	.																												.
Template Conservation										.	.
Template Sequence		M	D	Y	H	F	T	T	A	.	.	G	F	G	F	G	L	P	T	S	R	A	Y	A	E	Y	L	G	G	S	L	Q	L	Q	S	L	Q	G	I	G	T	D	V	Y	L	R	L	R	H
Template Known Secondary structure		T	S	T	T					.	.			S														T									T	T	T
Template Predicted Secondary structure										.	.
Template SS confidence
		299	300	.	.	.	.	.	.			.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions