Job Description P0AFB5 Confidence 97.52% Date Thu Jan 5 11:25:49 GMT 2012 Rank 100 Aligned Residues 89 % Identity 33% Template c1ea6A_ PDB info PDB header:dna repair Chain: A: PDB Molecule:pms1 protein homolog 2; PDBTitle: n-terminal 40kda fragment of nhpms2 complexed with adp Resolution 2.7 Å

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		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Q	I	E	Q	V	L	L	N	I	V	R	N	A	L	Q	A	L	G	P	E	G	G	E	I	I	L	R	T	R	T	A	F	Q	L	T	L	H	G	E	R	Y	R	L	A	A	R	I	D	V	E	D	N	G	P	G	I	P	P	H	L	Q	D	T	L	F	Y	P	M	V	S	G	R	E	G	G	T	G	L	G
Query Conservation
Alig confidence																			.	.	.											.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.											.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	S	L	S	T	A	V	K	E	L	V	E	N	S	L	D	A	.	.	.	G	A	T	N	I	D	L	K	L	K	.	.	.	.	.	.	.	.	.	.	.	D	Y	G	V	D	L	I	E	V	S	D	N	G	C	G	V	E	E	E	N	F	E	.	.	.	.	.	.	.	.	.	.	.	G	L	T	L	E	A
Template Known Secondary structure			S															T	.	.	.	T		S								.	.	.	.	.	.	.	.	.	.	.	T	T	T	T	S								S					T	T	S	T	T	.	.	.	.	.	.	.	.	.	.	.	T	T	T
Template Predicted Secondary structure																			.	.	.											.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.				50	.	.	.	.	.	.	.	.	.												60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.												.	.	.	.	.	.
		316	.	.	.	320	.	.																				.	.	.	.	.	.	.	330	.	.	.	.	.	.	.			.	.	340	.	.	.	.						.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.								.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.								.	.	.	.	.
Query Sequence		L	S	I	A	R	N	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	D	Q	H	S	G	K	I	E	F	T	S	W	P	G	.	.	H	T	E	F	S	V	Y	.	.	.	.	.	L	P	I	R	K
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.								.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.								.	.	.	.	.
Template Conservation
Template Sequence		L	S	S	L	C	A	L	S	D	V	T	I	S	T	C	H	A	S	A	K	V	G	T	R	L	M	F	D	H	N	G	K	I	I	Q	K	T	P	Y	P	R	P	R	G	T	T	V	S	V	Q	Q	L	F	S	T	L	P	V	R	H
Template Known Secondary structure									S									T	T		S	S								T	T	S												S								S	T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions