|   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | E | D | D | V | L | E | Q | L | D | A | Q | D | N | L | F | S | F | M | K | T | A | H | T | I | L | L | Q | G | I | R | Q | F | L | P | S | L | F | V | D | N | D | E | E | I | V | E | Y | A | V | K | P | L | L | A | Q | S | G | P | L | D | D | I | D | V | A | L | R | L | I | Y | A | L | G | K | M | D | K | W | L |
Query Conservation |   |
  |
|   |   |   |
|
|   |
|   |
|   |
|
|   |
|
|   |   |
|   |
|   |
|   |
|
|   |   |
|   |   |
|
|   |   |   |
|   |   |   |
|   |   |
|
|
|
|
|   |   |   |
|
|   |   |   |
|
|
|
|
|
|
|   |
|
|
|
|
|   |   |
|
|
|
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |
|   |
|   |
|   |
|
|   |
|
|   |   |
|   |
|   |
|   |
|
|   |   |
|   |   |
|
|   |   |   |
| . |   |   |
|
|   |
|   |
|   |   |
|
|   |
|   |   |   |   |
|
|
|
|
|
|
|   |
|
|
|
|
|
|   |
|
|
|
|   |   |   |   |
Template Sequence |   |
N | E | S | E | I | I | E | R | L | N | S | A | P | S | V | R | G | F | F | I | A | T | V | D | V | F | N | E | S | I | D | G | L | I | Q | R | I | F | . |
R | K | D | N | F | A | V | Q | S | V | V | G | P | L | L | Q | D | S | G | P | L | G | D | L | S | V | R | L | K | L | L | F | G | L | G | V | L | P | D | D | I |
Template Known Secondary structure |   |
| T | T | T | T |  |  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | S | T | T | S | T | T |
| S |  |  |  |  |  |  |  |  |  |  |  | T |
| S |
|  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | |
. | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
  |
  |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | |
|
|
140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | A | D | I | T | H | F | S | Q | F | W | H | Y | L | N | E | Q | D | E | T | P | G | F | A | D | D | M | T | W | D | F | I | S | N | V | N | S | I | T | R | N | A | M | L | Y | D | A | L | K | A | M | K | F | A | D | . |
. |
. |
F | S | V | W | S | E | A | R | F | S | G | M | V | K | T | A | L | T | L | A | V | T |
Query Conservation |   |
  |   |
|
|   |   |   |
|
|
|
|
|   |
|   |
|   |   |   |   |   |
|
|   |
|   |   |
|   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   | . | . | . |   |   |   |
|   |   |   |
|   |   |
|
|
|
|
|   |
|   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |   |
|
|
|
|
|
|   |
|
|
|   |   |   |   |   |
|
|   |
|   |   |
|   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|
|   |   |   |
|   |   |
|   |
|   |
|   |
|   |
|
|
|
|
Template Sequence |   |
Y | H | D | I | E | D | I | I | K | L | K | N | H | L | N | S | D | A | S | D | Y | E | F | T | D | P | N | I | L | E | P | I | K | K | L | H | L | V | K | K | X | G | X | V | Q | L | E | V | N | E | P | D | D | D | I | D | L | E | F | Y | Q | L | Q | L | Q | R | Q | Q | Q | I | I | K | S | G | L | S | L | A | I | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S | S |
|
|
| T | T | S |  |  |  |  |  |  |  | T | T | S |  |  |  |  |  | T | T |
|
|
|
|
|
|
|
|
| S | S | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . |
  |
  |   |
162 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
Query Sequence |   |
T | T | L | K | E | L | T |
Query Conservation |   |
  |   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |
|   |
Template Sequence |   |
E | I | C | N | E | L | G |
Template Known Secondary structure |   |
 |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
  |   |
165 | . | . | . | . | 170 | . |
  |