Job Description P11663 Confidence 3.26% Date Thu Jan 5 11:32:48 GMT 2012 Rank 58 Aligned Residues 32 % Identity 31% Template c1jjrA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:thyroid autoantigen; PDBTitle: the three-dimensional structure of the c-terminal dna2 binding domain of human ku70 Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.			.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure													.	.												.	.
Query SS confidence													.	.												.	.
Query Sequence		V	E	Y	A	V	K	P	L	L	A	Q	.	.	S	G	P	L	D	D	I	D	V	A	L	.	.	R	L	I	Y	A	L	G	K	M	D
Query Conservation													.	.												.	.
Alig confidence													.	.												.	.
Template Conservation
Template Sequence		V	E	Y	S	E	E	E	L	K	T	H	I	S	K	G	T	L	G	K	F	T	V	P	M	L	K	E	A	C	R	A	Y	G	L	K	S
Template Known Secondary structure					S	S										T		T	T	S	S													T
Template Predicted Secondary structure
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions