 |
Job Description | P0A9G4 | Confidence | 92.12% | Date | Thu Jan 5 11:10:08 GMT 2012 |
Rank | 22 | Aligned Residues | 36 |
% Identity | 17% | Template | d1j5ya1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| Biotin repressor-like
|
Resolution | 2.30 |
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | |
|
|
|
. | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  | . | . | . | . |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | N | I | S | D | V | A | K | I | T | G | L | T | S | K | A | I | R | F | Y | . |
. |
. |
. |
E | E | K | G | L | V | T | P | P | M | R | S | E | N | G | Y | R | T |
Query Conservation |   |
|   |
|   |
|   |
|   |   |   |
|
|
|   |   |
|
|
|   |
| . | . | . | . |
|   |   |
|
|
|   |   |   |   |
|   |   |   |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|
|
|   |   |
|   |
|
|   |
|
|
|   |
|
|
|   |   |
|   |   |   |
| . | . |   |   |
|   |   |   |   |   |
|
|   |
|
Template Sequence |   |
V | S | G | A | Q | L | A | E | E | L | S | V | S | R | Q | V | I | V | Q | D | I | A | Y | L | R | S | L | G | . |
. |
Y | N | I | V | A | T | P | R | G | Y | V | L |
Template Known Secondary structure |   |
B |
|  |  |  |  |  |  |  |  | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | . | . |
|
|
|  |  |  | T | T |  |  |  |
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . |
|  |  |  |  |  |
|
|
|  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
25 | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | |
|
. | . | . | . | . | . | . | 60 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|