Job Description P0A9G4 Confidence 88.45% Date Thu Jan 5 11:10:08 GMT 2012 Rank 37 Aligned Residues 87 % Identity 16% Template c3op9A_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:pli0006 protein; PDBTitle: crystal structure of transcriptional regulator from listeria innocua Resolution 1.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	N	I	S	D	V	A	K	I	T	G	L	T	S	K	A	I	R	F	Y	E	E	K	G	L	V	T	P	P	M	R	S	E	N	G	Y	R	T	Y	T	Q	Q	H	L	N	E	L	T	L	L	R	Q	A	R	Q	V	G	F	N	L	E	E	S	G	E	L	V	N	L	F	N	D	P	Q	R	H	S	A	D	V
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.							.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.							.	.	.	.
Template Sequence		L	K	N	H	Q	I	A	E	L	L	N	V	Q	T	R	T	V	A	Y	Y	X	S	.	.	.	.	.	.	.	.	.	.	.	.	G	E	T	K	P	D	I	E	K	L	I	R	L	A	T	Y	F	.	.	.	.	.	H	L	S	I	D	E	.	.	.	.	L	V	G	Y	V	Q	E	V	W	N	D	L	S	L
Template Known Secondary structure												T	S											.	.	.	.	.	.	.	.	.	.	.	.	T	S	S															.	.	.	.	.	T						.	.	.	.			T							S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.							.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.													.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.						.	60	.	.	.	.					.	.	.	.	.	70	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	R	T	L	E	K	V	A	E	I	E	R	H	I	E	E	L	Q	S	M	R	D	Q	L	L	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	Q	W	L	L	S	L	N	L	R	S	E	E	E	I	A	K	I	K	I	L	V	D	T	V	E	T	L
Template Known Secondary structure								G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions