Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9G4
Confidence70.36%DateThu Jan 5 11:10:08 GMT 2012
Rank194Aligned Residues98
% Identity13%Templatec3k69A_
PDB info PDB header:transcriptionChain: A: PDB Molecule:putative transcription regulator; PDBTitle: crystal structure of a putative transcriptional regulator (lp_0360)2 from lactobacillus plantarum at 1.95 a resolution
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20 .........30.........40.........50.........60.........70......
Predicted Secondary structure 




....


























Query SS confidence 



















. . . .























































Query Sequence  MNISDVAKITGLTSKAIRFY. . . . EEKGLVTPPMRSENGYRTYTQQHLNELTLLRQARQVGFNLEESGELVNLFNDPQRH
Query Conservation 
 
 
 
   


  


 
....
  


    
   


 
    
  
  
  
   
 

  
  
          
Alig confidence 



















....























































Template Conservation   

  

    
    
 


  
 




 
  
  


 


 
  


 

  


                  
 
Template Sequence  VASRELAQSLHLNPVXIRNILSVLHKHGYLTGTVGKNGGYQLDLALADXNLGDLYDLTIPPTISYARFITGPSKADQSPI
Template Known Secondary structure  B
TS
GGGTTTSS
STT


S
GGGSBS


S

GGG

S






Template Predicted Secondary structure 





































Template SS confidence 















































































   28.30.........40.........50.........60.........70.........80.........90.........100.......
 
   77..80.........90........
Predicted Secondary structure 
Query SS confidence 





















Query Sequence  SADVKRRTLEKVAEIERHIEEL
Query Conservation         
      
   
  
Alig confidence 





















Template Conservation         
              
Template Sequence  AANISETLTDLFTVADRQYRAY
Template Known Secondary structure 
Template Predicted Secondary structure 


Template SS confidence 





















   112.......120.........130...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions