 |
Job Description | P0A9G4 | Confidence | 55.08% | Date | Thu Jan 5 11:10:08 GMT 2012 |
Rank | 342 | Aligned Residues | 62 |
% Identity | 13% | Template | c1g3wA_ |
PDB info |
PDB header:gene regulation | Chain: A: PDB Molecule:diphtheria toxin repressor; |
PDBTitle: cd-cys102ser dtxr
|
Resolution | 2.40 Å |
|
 |
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | |
|
|
|
. | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | 60 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  | . | . | . | . |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | N | I | S | D | V | A | K | I | T | G | L | T | S | K | A | I | R | F | Y | . |
. |
. |
. |
E | E | K | G | L | V | T | P | P | M | R | S | E | N | G | Y | R | T | Y | T | Q | Q | H | L | N | E | L | T | L | L | R | Q | A | R | Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
V | G | F | N | L | E | E | S | G | E |
Query Conservation |   |
|   |
|   |
|   |
|   |   |   |
|
|
|   |   |
|
|
|   |
| . | . | . | . |
|   |   |
|
|
|   |   |   |   |
|   |   |   |
|
|
|   |
|   |   |   |   |
|   |   |
|   |   |
|   |   |
|   |   | . | . | . | . | . | . | . | . | . |   |
|   |
|
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |
|
|   |   |
|   |
|
|   |   |
|
|
|   |   |
|   |   |
|   |   |   |
|
|
|   | . | . | . |   |   |   |   |   |   |
|   |
|
|   |   |
|   |   |   |
|   |   |
|   |
|
|
|
|
|
|
|   |
|
|   |   |   |
|
|   |   |   |   |   |
|   |   |
Template Sequence |   |
P | L | R | A | R | I | A | E | R | L | E | Q | S | G | P | T | V | S | Q | T | V | A | R | M | E | R | D | G | L | V | V | . |
. |
. |
V | A | S | D | R | S | L | Q | M | T | P | T | G | R | T | L | A | T | A | V | M | R | K | H | R | L | A | E | R | L | L | T | D | I | I | G | L | D | I | N | K | V | H | D |
Template Known Secondary structure |   |
| B |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |  |  | . | . | . |  |
| T | T | S | B |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
|
|
| T | T | T |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  | . | . | . |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
25 | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | |
|
|
. | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|