Return to main results Retrieve Phyre Job Id

Job DescriptionP03012
Confidence37.22%DateThu Jan 5 10:57:51 GMT 2012
Rank381Aligned Residues28
% Identity18%Templated1sd4a_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Penicillinase repressor
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   154.... .160........ .170.........180.
Predicted Secondary structure 

.

....


Query SS confidence 




.









. . . .












Query Sequence  MWQQG. LGASHISKTM. . . . NIARSTVYKVINE
Query Conservation      
. 
   

  
.... 

 


 
 
  
Alig confidence 




.









....












Template Conservation 

     
  

   
        


 
 
 
Template Sequence  IWDKKSVSANEIVVEIQKYKEVSDKTIRTLITR
Template Known Secondary structure  SSSTTS


Template Predicted Secondary structure 









Template SS confidence 
































   1920.........30.........40.........50.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions