 |
Job Description | P03012 | Confidence | 86.80% | Date | Thu Jan 5 10:57:51 GMT 2012 |
Rank | 141 | Aligned Residues | 35 |
% Identity | 6% | Template | c3gn5B_ |
PDB info |
PDB header:dna binding protein | Chain: B: PDB Molecule:hth-type transcriptional regulator mqsa (ygit/b3021); |
PDBTitle: structure of the e. coli protein mqsa (ygit/b3021)
|
Resolution | 2.15 Å |
|
  |   |
146 | . | . | . | 150 | . | . | . | . | . | . | . | |
. | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | D | R | D | A | V | L | N | M | W | Q | Q | . |
G | L | G | A | S | H | I | S | K | T | M | N | I | A | R | S | T | V | Y | K | V | I | N |
Query Conservation |   |
  |   |   |   |   |
|   |   |   |   |   |   | . |
|   |
|   |   |   |
|
|   |   |
|   |
|
|   |
|
|
|   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |   |
|   |   |   |
|
|
|
|   |   |
|
|   |   |
|
|   |   |   |   |
|
|
|
|   |
|   |
Template Sequence |   |
V | A | P | E | F | I | V | K | V | R | K | K | L | S | L | T | Q | K | E | A | S | E | I | F | G | G | G | V | N | A | F | S | R | Y | E | K |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |
| S |
| T | T |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
69 | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|