Job Description P03012 Confidence 99.90% Date Thu Jan 5 10:57:51 GMT 2012 Rank 8 Aligned Residues 121 % Identity 27% Template c3g13B_ PDB info PDB header:recombination Chain: B: PDB Molecule:putative conjugative transposon recombinase; PDBTitle: crystal structure of putative conjugative transposon recombinase from2 clostridium difficile Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.					.	.	.	.	.	20	.	.	.	.	.	.						.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.													.	.	.	.	.																	.	.																	.	.
Query SS confidence																.	.	.	.													.	.	.	.	.																	.	.																	.	.
Query Sequence		M	R	L	F	G	Y	A	R	V	S	T	S	Q	Q	.	.	.	.	S	L	D	I	Q	V	R	A	L	K	D	A	.	.	.	.	.	G	V	K	A	N	R	I	F	T	D	K	A	S	G	S	S	.	.	S	D	R	K	G	L	D	L	L	R	M	K	V	E	E	G	.	.	D	V	I	L	V	K	K	L	D
Query Conservation																.	.	.	.													.	.	.	.	.																	.	.																	.	.
Alig confidence																.	.	.	.													.	.	.	.	.																	.	.																	.	.
Template Conservation
Template Sequence		L	R	V	A	A	Y	C	R	V	S	T	D	S	E	D	Q	L	N	S	Y	K	S	Q	V	Q	Y	Y	T	D	X	I	K	K	N	K	E	W	V	L	A	D	I	Y	A	D	E	A	I	T	G	T	Q	V	T	K	R	E	D	F	Q	R	X	I	N	D	C	X	N	G	E	I	D	X	V	F	T	K	S	I	S
Template Known Secondary structure														S	S		G	G	G	S														T		T	T											B		T	T	S	S		B														T	T			S					S		G	G
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	G	R	D	T	A	D	M	I	Q	L	I	K	E	F	D	A	Q	G	V	S	I	R	F	I	D	D	G	I	S	T	D	G	E	M	G	K	M	V	V	T	I	L	S	A	V	A	Q	A	E	R	Q	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	F	A	R	N	T	L	D	T	L	K	Y	V	R	X	L	K	E	R	N	I	A	V	Y	F	E	D	E	K	I	N	T	L	T	X	D	G	E	L	L	L	V	V	L	S	S	V	A	Q	Q	E	V	E	N
Template Known Secondary structure		G	S	S	S	S														T	T						T	T	T	T			T	T	S
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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