Job Description P03012 Confidence 21.09% Date Thu Jan 5 10:57:51 GMT 2012 Rank 418 Aligned Residues 76 % Identity 8% Template c3eqxB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:fic domain containing transcriptional regulator; PDBTitle: crystal structure of a fic family protein (so_4266) from shewanella2 oneidensis at 1.6 a resolution Resolution 1.60 Å

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		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		M	V	V	T	I	L	S	A	V	A	Q	A	E	R	Q	R	I	L	E	R	T	N	E	G	R	Q	E	A	M	A	K	G	V	V	F	G	R	K	R	K	I	D	R	D	A	V	L	N	M	W	Q	Q	G	.	L	G	A	S	H	I	S	K	T	M	N	I	A	R	S	T	V	Y	K	V	I	N	E
Query Conservation																																																							.
Alig confidence																																																							.
Template Conservation
Template Sequence		I	I	F	I	L	N	A	V	E	Q	T	A	K	W	T	T	H	K	I	A	A	A	R	E	L	I	A	H	T	T	E	Y	V	R	Q	Q	L	P	K	I	Y	S	H	E	L	V	Q	V	I	F	E	Q	P	Y	C	R	I	Q	N	L	V	E	S	G	L	A	K	R	Q	T	A	S	V	Y	L	K	Q
Template Known Secondary structure																																							T	T	T													S										T	T	S
Template Predicted Secondary structure
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions