Job Description P03012 Confidence 47.98% Date Thu Jan 5 10:57:51 GMT 2012 Rank 360 Aligned Residues 45 % Identity 11% Template c2xzmO_ PDB info PDB header:ribosome Chain: O: PDB Molecule:rps13e; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 1 Resolution 3.93 Å

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		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.											.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.
Query Sequence		V	F	G	R	K	R	K	I	D	R	D	A	V	L	N	M	W	Q	Q	G	L	G	A	S	H	I	S	K	T	M	.	.	.	.	.	.	.	.	.	.	N	I	A	R	S	T	V	Y	K	V	I	N	E	S	N
Query Conservation																																.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	L	H	M	T	P	S	T	V	V	D	L	S	V	K	L	A	K	K	G	L	T	P	S	Q	I	G	V	I	L	R	D	Q	H	G	I	P	Q	V	R	F	L	T	G	Q	K	I	L	R	I	L	K	K	N	G
Template Known Secondary structure		S																		T	T													S	S			S							S	S									T	T
Template Predicted Secondary structure
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions