Job Description P03012 Confidence 100.00% Date Thu Jan 5 10:57:51 GMT 2012 Rank 2 Aligned Residues 173 % Identity 31% Template c2r0qF_ PDB info PDB header:recombination/dna Chain: F: PDB Molecule:putative transposon tn552 dna-invertase bin3; PDBTitle: crystal structure of a serine recombinase- dna regulatory2 complex Resolution 3.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	L	F	G	Y	A	R	V	S	T	S	Q	Q	S	L	D	I	Q	V	R	A	L	K	D	A	G	V	K	A	N	R	I	F	T	D	K	A	S	G	S	S	S	D	R	K	G	L	D	L	L	R	M	K	V	E	E	G	D	V	I	L	V	K	K	L	D	R	L	G	R	D	T	A	D	M	I	Q	L	I
Query Conservation
Alig confidence				.																										.	.							.	.	.	.	.	.
Template Conservation				.																										.	.							.	.	.	.	.	.
Template Sequence		M	I	.	I	G	Y	A	R	V	S	S	L	D	Q	N	L	E	R	Q	L	E	N	L	K	T	F	G	A	.	.	E	K	I	F	T	E	.	.	.	.	.	.	K	N	R	P	I	L	Q	K	A	L	N	F	V	R	M	G	D	R	F	I	V	E	S	I	D	R	L	G	R	N	Y	N	E	V	I	H	T	V
Template Known Secondary structure				.							B	T	T	B	T	T	T									T	T	T		.	.	S						.	.	.	.	.	.															T	T						S	S	G	G	G	G		S	S
Template Predicted Secondary structure				.																										.	.							.	.	.	.	.	.
Template SS confidence
		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.							.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.							110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.																																							.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.																																							.	.	.	.	.	.	.
Query Sequence		K	E	F	D	A	Q	G	V	S	I	R	F	I	D	D	G	I	S	T	D	G	E	M	G	K	M	V	V	T	.	.	.	.	.	.	I	L	S	A	V	A	Q	A	E	R	Q	R	I	L	E	R	T	N	E	G	R	Q	E	A	M	A	K	G	V	V	F	G	R	K	R	K	I	D	.	.	.	.	.	.	.
Query Conservation																															.	.	.	.	.	.																																							.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.																																							.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	Y	L	K	D	K	E	V	Q	L	M	I	T	S	L	P	M	M	N	E	V	I	G	N	P	L	L	D	K	F	M	K	D	L	I	I	Q	I	L	A	M	V	S	E	Q	E	R	N	E	S	K	Q	A	Q	G	I	Q	V	A	K	E	K	G	V	Y	K	G	R	P	L	L	Y	S	P	N	A	K	D	P	Q
Template Known Secondary structure								T						T	T	S	T	T					T	T																							T	T	T	T				T	T	T	T	S	S	S	S	S	S	S				S				S	S	S	T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
						148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	R	D	A	V	L	N	M	W	Q	Q	G	L	G	A	S	H	I	S	K	T	M	N	I	A	R	S	T	V	Y	K	V	I	N	E	S
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		K	R	V	I	Y	H	R	V	V	E	M	L	E	E	G	Q	A	I	S	K	I	A	K	E	V	N	I	T	R	Q	T	V	Y	R	I	K	H	D	N
Template Known Secondary structure															T	T											T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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