Return to main results Retrieve Phyre Job Id

Job DescriptionP03012
Confidence25.25%DateThu Jan 5 10:57:51 GMT 2012
Rank410Aligned Residues30
% Identity13%Templatec1ic8B_
PDB info PDB header:transcription/dnaChain: B: PDB Molecule:hepatocyte nuclear factor 1-alpha; PDBTitle: hepatocyte nuclear factor 1a bound to dna : mody3 gene2 product
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   153......160.........170.........180..
Predicted Secondary structure 







Query SS confidence 





























Query Sequence  NMWQQGLGASHISKTMNIARSTVYKVINES
Query Conservation       
 
   

  
 

 


 
 
   
Alig confidence 





























Template Conservation   
    


  
   

 


 

  
   
Template Sequence  YLQQHNIPQREVVDTTGLNQSHLSQHLNKG
Template Known Secondary structure  TT




S
Template Predicted Secondary structure 









Template SS confidence 





























   122.......130.........140.........150.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions