 |
Job Description | P24175 | Confidence | 31.37% | Date | Thu Jan 5 11:40:52 GMT 2012 |
Rank | 68 | Aligned Residues | 62 |
% Identity | 19% | Template | c3f93D_ |
PDB info |
PDB header:hydrolase | Chain: D: PDB Molecule:beta-glucosidase; |
PDBTitle: crystal structure of exo-1,3/1,4-beta-glucanase (exop) from2 pseudoalteromonas sp. bb1
|
Resolution | 2.45 Å |
|
 |
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
40 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | 50 | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . |
|  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
Query Sequence |   |
C | F | K | A | Y | D | I | R | G | K | L | G | E | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | N | E | D | I | A | W | R | I | G | R | A | Y | G | E | F | L | K | P | K | . |
. |
. |
. |
. |
. |
. |
. |
T | I | V | L | G | G | D | V | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | T | S |
Query Conservation |   |
  |
|
|
|   |
|
|
|
|   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |   | . | . | . | . | . | . | . | . |   |
|
|
|
|   |
|   |
| . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
Template Conservation |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |
|
|
|   |
|
|   |   |   |   |
|
|
|
|   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |
|   |
|
|   |
|   |   |   |   |   |
|
|   |
|
|
|   |
|   |
|
|
|
|
|   |   |
|
|
|
|
|
|
|   |
|   |
Template Sequence |   |
V | W | G | T | D | A | M | H | G | H | S | N | V | Y | G | A | T | L | F | P | H | N | I | G | L | G | A | A | R | D | T | D | L | I | K | R | I | G | Q | A | T | A | K | E | V | A | A | T | G | I | E | W | S | F | A | P | T | V | A | V | V | R | D | D | R | W | G | R | T | Y | E | S | Y | S | E | D | P | D | L | V |
Template Known Secondary structure |   |
 |  |  |  |  |
| T | T | S | S | T | T | S | T | T |
|
|
|
|
|
|  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |
|
| B |
|
|
|
|
|
| T | T | S | T | T | G | G | G | S | S |
| S |
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
105 | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . |
  |
  |   |
52 | . | . | . | . | . | . | . | 60 | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
Query Sequence |   |
E | T | L | K | L | A | L | A | K | G | L | Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
D | A | G | V |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   | . | . | . | . | . | . | . | . | . |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|   |
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |
|
|
Template Sequence |   |
K | R | Y | A | G | E | M | V | T | G | I | Q | G | D | V | G | A | D | F | L | K | G | S | N | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
| T | T | T | T | T | T |
| T | T |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
185 | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|