 |
Job Description | P24175 | Confidence | 20.16% | Date | Thu Jan 5 11:40:52 GMT 2012 |
Rank | 91 | Aligned Residues | 41 |
% Identity | 20% | Template | c2zkiH_ |
PDB info |
PDB header:transcription | Chain: H: PDB Molecule:199aa long hypothetical trp repressor binding |
PDBTitle: crystal structure of hypothetical trp repressor binding2 protein from sul folobus tokodaii (st0872)
|
Resolution | 2.90 Å |
|
  |   |
38 | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | K | T | I | V | L | G | G | D | V | R | L | T | S | E | T | L | K | L | A | L | A | K | G | L | Q | D | A | G | V | D | V | L | D | I | G | M | S | G | T | E |
Query Conservation |   |
  |   |   |
|
|
|
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|   |
|   |   |   |
|   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
|
|
|   |
|   |
|
|
|   |   |
|
|   |   |   |
|   |
|   |   |   |   |
|   |
|
|   |   |   |   |
|   |   |   |   |
Template Sequence |   |
K | P | N | I | L | V | L | F | Y | G | Y | G | S | I | V | E | L | A | K | E | I | G | K | G | A | E | E | A | G | A | E | V | K | I | R | R | V | R | E | T | L |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |
|
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |  |
|
|
|
| S |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|