 |
Job Description | P24175 | Confidence | 37.84% | Date | Thu Jan 5 11:40:52 GMT 2012 |
Rank | 60 | Aligned Residues | 78 |
% Identity | 17% | Template | c2q9uB_ |
PDB info |
PDB header:oxidoreductase | Chain: B: PDB Molecule:a-type flavoprotein; |
PDBTitle: crystal structure of the flavodiiron protein from giardia2 intestinalis
|
Resolution | 1.90 Å |
|
 |
  |   |
23 | . | . | . | . | . | . | 30 | . | . | . | . | . | . | |
|
|
|
. | . | . | 40 | . | . | . | . | . | . | . | . | . | |
50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . |
|
|
|
|  |  |  |  |  |
|
|
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | I | A | W | R | I | G | R | A | Y | G | E | F | L | . |
. |
. |
. |
K | P | K | T | I | V | L | G | G | D | V | R | L | . |
T | S | E | T | L | K | L | A | L | A | K | G | L | Q | D | A | G | V | D | V | L | D | I | G | M | S | G | T | E | E | I | Y | F | A | T | F | H | L | G | V | D | G | G | I | E | V | T | A |
Query Conservation |   |
  |   |   |   |   |
|   |   |
|   |   |   |   |
| . | . | . | . |   |   |   |   |
|
|
|
|   |
|   |
|   | . |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|   |
|   |   |   |
|   |   |
|
|
|   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|   |   |
|
|
|   |   |   |
|   |   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |
|
|   |
|
|
|
Template Sequence |   |
D | A | M | G | L | A | I | A | E | Y | D | R | W | S | K | G | Q | H | C | Q | K | K | V | T | V | V | L | D | S | M | Y | G | T | T | H | R | M | A | L | A | L | L | D | G | A | R | S | T | G | C | E | T | V | L | L | E | M | T | S | S | D | I | T | K | V | A | L | H | T | Y | D | S | G | A | V | A | F | A | S | P |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
| S |  |  |  |  |  |  |
|
| S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  | G | G | G |
|
|  |  |  |  |  |  |  |  |  |  |
| S |  |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
237 | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . |
  |
  |   |
98 | . | 100 |
Predicted Secondary structure |   |
|
|
|
Query SS confidence |   |
|
|
|
Query Sequence |   |
S | H | N |
Query Conservation |   |
|
|
|
Alig confidence |   |
|
|
|
Template Conservation |   |
|
|   |
Template Sequence |   |
T | L | N |
Template Known Secondary structure |   |
 |  | T |
Template Predicted Secondary structure |   |
|
|
|
Template SS confidence |   |
|
|
|
  |   |
317 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|