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Job DescriptionP24175
Confidence100.00%DateThu Jan 5 11:40:52 GMT 2012
Rank9Aligned Residues444
% Identity21%Templatec1kfiA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:phosphoglucomutase 1; PDBTitle: crystal structure of the exocytosis-sensitive2 phosphoprotein, pp63/parafusin (phosphoglucomutase) from3 paramecium
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30...... ...40.........50.........60.........70.. .....
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Query Sequence  FKAYDIRGKLGEELNEDIAWRIGRAYGEFL. . . . . . KPKTIVLGGDVRLTSETLKLALAKGLQDAGVDVLDI. . . GMSGT
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Template Sequence  PGTSGLRKKVSEATQPNYLENFVQSIFNTLRKDELKPKNVLFVGGDGRYFNRQAIFSIIRLAYANDISEVHVGQAGLMST
Template Known Secondary structure 
BTTBTSTTS
GGGSSSS



TTTT
SGGG
B
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   21........30.........40.........50.........60.........70.........80.........90.........100
 
   78.80........ .90.........100..... ....110.........120.........130.........140....
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Query Sequence  EEIYFATFHLG. . . . . VDGGIEVTASHNPMDYN. . . . GMKLVREGARPISGDTGLRDVQRLAEANDFPPVDETKRG. . . .
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Template Sequence  PASSHYIRKVNEEVGNCIGGIILTASHNPGGKEHGDFGIKFNVRTGAPAPEDFTDQIYTHTTKIKEYLTVDYEFEKHINL
Template Known Secondary structure  S



TTS

STTT

TTSSB

TT





GGGT

T
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   101........110.........120.........130.........140.........150.........160.........170.........180
 
   145....150.........160........ .170.........180.........190... ......
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Query Sequence  . . . . . . . . . . . . . . . . . . RYQQINLRDAYVDHLFGYINVKNL. . . . . . TPLKLVINSGNGAAGPVVDAIEARF. KALGAP
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Template Sequence  DQIGVYKFEGTRLEKSHFEVKVVDTVQDYTQLMQKLFDFDLLKGLFSNKDFSFRFDGMHGVAGPYAKHI. . . FGTLLGCS
Template Known Secondary structure  TS
B

TT


SSS
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TT


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   181........190.........200.........210.........220.........230.........240......... 250.......
 
   200.........210.........220.........230.. .......240.........250.........260.........270...
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Query Sequence  VELIKVHNTPDGNFPNGIPNPLLPECRDDTRNA. . . . . . VIKHGADMGIAFDGDFDRCFLFDEKGQFIEGYYIVGLLAEA
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Template Sequence  KESL. LNCDPSEDFGGGHPDPNLTYAHDLVELLDIHKKKDVGTVPQFGAACDGDADRNMILGRQFFVTPSDSLAVIAANA
Template Known Secondary structure  GGG.S
S

TTGGGS



STTTTTTTT

S
GGGS
S
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BTT
T
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   258.260. ........270.........280.........290.........300.........310.........320.........330......
 
   274.....280.. .......290.........300.........310.........320.........330.........340.........350..
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Query Sequence  FLEKNPGAK. IIHDPRLSWNTVDVVTAAGGTPVMSKTGHAFIKERMRKEDAIYGGEMSAHHYFRDFAYCDSGMIPWLLVA
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Template Sequence  NLIFKNGLLGAARSMPTSGALDKVAAKNGIKLFETPTGWKFFGNLMDAGLINLCGEESFGT. GSNHIREKDGIWAVLAWL
Template Known Secondary structure  STT



TTS
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SSTTTS
STTT.TTSSS

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   337..340.........350.........360.........370.........380.........390....... ..400.........410.....
 
   353......360 .........370.........380... ......390.........400.. .
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Query Sequence  ELVCLKDK. . . . . . TLGELVRDRMAAFPASGEINSKL. AQPVEAINRVEQHFSREAL. . . . . . . . . . . . . . . . . . . . . . A
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Template Sequence  TILAHKNKNTDHFVTVEEIVTQYWQQFGRNYYSRYDYEQVDSAGANKMMEHLKTKFQYFEQLKQGNKADIYDYVDPVDQS
Template Known Secondary structure  TSS
SS




TTTTSTT



TTT

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   416...420.........430.........440.........450.........460.........470.........480.........490.....
 
   404.....410....... ..420......... 430.........440.........450.....
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Query Sequence  VDRTDGISMTFADW. RFNLRTSNTEPV. . . VRLNVESRGDVPLMEARTRTLLTLLN
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Template Sequence  VSKNQGVRFVFGDGSRIIFRLSGTGSVGATIRIYFEQFEQQQIQHETATALANIIK
Template Known Secondary structure 




TTS

SS
SSSSS


S
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   496...500.........510.........520.........530.........540.........550.
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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