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Job DescriptionP24175
Confidence100.00%DateThu Jan 5 11:40:52 GMT 2012
Rank7Aligned Residues443
% Identity23%Templatec1c4gB_
PDB info PDB header:transferaseChain: B: PDB Molecule:protein (alpha-d-glucose 1-phosphate PDBTitle: phosphoglucomutase vanadate based transition state analog2 complex
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.... .....30...... ...40.........50.........60.........70.. .....
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Query Sequence  FKAYDIRGKLGEELNEDI. AWRIGRAYGEFL. . . . . KPKTIVLGGDVRLTSETLKLALAKGLQDAGVDVLDI. . . GMSGT
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Template Sequence  PGTSGLRKRVKVFQSSTNYAENFIQSIISTVEPAQRQEATLVVGGDGRFYMKEAIQLIVRIAAANGIGRLVIGQNGILST
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SSSSSSTTTTSS
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   16...20.........30.........40.........50.........60.........70.........80.........90.....
 
   78.80.........90.........100..... ....110.........120.........130.........140..
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Query Sequence  EEIYFATFHLGVDGGIEVTASHNPMDYN. . . GMKLVREGARPISGDTGLRDVQRLAEANDFPPVDETK. . . . . . . . . . . .
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Template Sequence  PAVSCIIRKIKAIGGIILTASHNPGGPNGDFGIKFNISNGGPAPEAITDKIFQISKTIEEYAICPDLKVDLGVLGKQQFD
Template Known Secondary structure  T
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TTS

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   96...100.........110.........120.........130.........140.........150.........160.........170.....
 
   143......150.........160........ .170.........180.........190... ......200........
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Query Sequence  . . . . . . RGRYQQINLRDAYVDHLFGYINVKNL. . . . . . . TPLKLVINSGNGAAGPVVDAIEARF. KALGAPVELIKVHNT
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Template Sequence  LENKFKPFTVEIVDSVEAYATMLRNIFDFNALKELLSGPNRLKIRIDAMHGVVGPYVKKI. . . LCEELGAP. ANSAVNCV
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TT
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   176...180.........190.........200.........210.........220.........230..... ....240... ......250.
 
   209210.........220.........230.........240.........250.........260.........270..... ....280...
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Query Sequence  PDGNFPNGIPNPLLPECRDDTRNAVIKHGADMGIAFDGDFDRCFLFDEKGQFIEGYYIVGLLAEAFL. . . . . EKNPGAKI
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Template Sequence  PLEDFGGHHPDP. NLTYAADLVETMKSGEHDFGAAFDGDGDRNMILGKHGFFVNPSDSVAVIAANIFSIPYFQQTGVRGF
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   252.......260... ......270.........280.........290.........300.........310.........320.........330
 
   284.....290.........300.........310.........320.........330.........340.........350.........360...
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Query Sequence  IHDPRLSWNTVDVVTAAGGTPVMSKTGHAFIKERMRKEDAIYGGEMSAHHYFRDFAYCDSGMIPWLLVAELVCLKDKTLG
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Template Sequence  ARSMPTSGALDRVANATKIALYETPTGWKFFGNLMDASKLSLCGEESFGT. GSDHIREKDGLWAVLAWLSILATRKQSVE
Template Known Secondary structure  TTS
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   331........340.........350.........360.........370.........380 .........390.........400.........
 
   364.....370....... ..380.........390.........400 .........410
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Query Sequence  ELVRDRMAAFPASG. . . . EINSKLAQPVEAINRVEQHFSRE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . ALAVDRTDGI
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Template Sequence  DILKDHWHKFGRNFFTRYDYEEVEAEGATKMMKDLEALMFDRSFVGKQFSANDKVYTVEKADNFEYHDPVDGSVSKNQGL
Template Known Secondary structure 

SSGGGGG
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   410.........420.........430.........440.........450.........460.........470.........480.........
 
   411...... ..420......... 430...... ...440.........450.....
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Query Sequence  SMTFADW. RFNLRTSNTEPV. . . VRLNVES. . RGDVPLMEARTRTLLTLLN
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Template Sequence  RLIFADGSRIIFRLSGTGSAGATIRLYIDSYEKDNAKINQDPQVMLAPLIS
Template Known Secondary structure  TTS


SSSSS
STS
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   490.........500.........510.........520.........530.........540
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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