Job Description P31550 Confidence 100.00% Date Thu Jan 5 11:48:11 GMT 2012 Rank 11 Aligned Residues 299 % Identity 19% Template d1xvxa_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.53

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	K	P	V	L	T	V	Y	T	Y	D	S	F	A	A	D	W	G	P	G	P	V	V	K	K	A	F	E	A	D	C	N	C	E	L	K	L	V	A	L	E	D	G	V	S	L	L	N	R	L	R	M	E	G	K	N	S	K	A	D	V	V	L	G	L	D	N	N	L	L	D	A	A	S	K	T	G	L	F
Query Conservation
Alig confidence															.	.	.	.																									.
Template Conservation															.	.	.	.																									.
Template Sequence		S	N	D	S	G	I	V	V	Y	N	A	Q	H	.	.	.	.	E	N	L	V	K	S	W	V	D	G	F	T	K	D	T	G	I	K	V	T	L	R	N	G	.	G	D	S	E	L	G	N	Q	L	V	Q	E	G	S	A	S	P	A	D	V	F	L	T	E	N	S	P	A	M	V	L	V	D	N	A	K	L	F
Template Known Secondary structure					S								S		.	.	.	.																									.													G	G	G				S					S	S	S									T	T		B
Template Predicted Secondary structure															.	.	.	.																									.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.					.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		97	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure								.																																					.	.
Query SS confidence								.																																					.	.
Query Sequence		A	K	S	G	V	A	.	A	D	A	V	N	V	P	G	G	W	N	N	D	T	F	V	P	F	D	Y	G	Y	F	A	F	V	Y	D	K	N	K	L	K	N	P	P	.	.	Q	S	L	K	E	L	V	E	S	D	Q	N	W	R	V	I	Y	Q	D	P	R	T	S	T	P	G	L	G	L	L	L	W	M	Q	K
Query Conservation								.																																					.	.
Alig confidence								.																																					.	.																					.	.
Template Conservation																																																																			.	.
Template Sequence		A	P	L	D	A	V	T	Q	A	Q	V	A	Q	E	Y	R	P	E	H	G	R	W	T	G	I	A	A	R	S	T	V	F	V	Y	N	P	E	K	I	S	E	A	E	L	P	K	S	I	M	D	L	A	K	P	E	W	K	G	R	W	A	A	S	P	S	.	.	G	A	D	F	Q	A	I	V	S	A	M	L	E
Template Known Secondary structure												B		G	G	G	S		S	S	S	S															T	T	T	S		G	G	G	S		S	S	G	G	G	G	G	S	G	G	G	T	T	S					T	T	.	.	S
Template Predicted Secondary structure																																																																			.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.			.	.	.	.	.	.	.	.	150	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.			.	.	230	.	.	.	.	.	.	.	.	.				240	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.													.	.	.
Query SS confidence																																																								.	.													.	.	.
Query Sequence		V	Y	G	D	D	A	P	Q	A	W	Q	K	L	A	K	K	T	V	T	V	T	K	G	W	S	E	A	Y	G	L	F	L	K	G	E	S	D	L	V	L	S	Y	T	T	S	P	A	Y	H	I	L	E	E	K	.	.	K	D	N	Y	A	A	A	N	F	S	E	G	.	.	.	H	Y	L	Q	V	E	V	A	A
Query Conservation																																																								.	.													.	.	.
Alig confidence																																																								.	.													.	.	.
Template Conservation
Template Sequence		L	K	G	E	K	A	T	L	E	W	L	K	A	M	K	T	N	F	T	A	Y	K	G	N	S	T	V	M	K	A	V	N	A	G	Q	I	D	G	G	V	I	Y	H	Y	Y	R	F	V	D	Q	A	K	T	G	E	N	S	G	K	T	Q	L	H	Y	F	K	H	Q	D	P	G	A	F	V	S	I	S	G	G	G
Template Known Secondary structure																							S	S										T	T	S	S	S						T								T	T	T		T	T	T	T	T								T	T		G	G	G
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.		.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		R	T	A	A	S	K	Q	P	E	L	A	Q	K	F	L	Q	F	M	V	S	P	A	F	Q	N	A	I	P	T	G	N	W	M	.	Y	P	V	A	N	V	T	L	P	A	G	F	E	K	L	T	K	P	A	T	T	L	E	F	T	P	A	E	V	A	A	Q	R	Q	A	W	I	S	E	W	Q	R	A
Query Conservation																																			.
Alig confidence																																			.																														.	.
Template Conservation																																																																	.	.
Template Sequence		V	L	A	S	S	K	H	P	K	E	A	Q	E	F	V	K	W	I	T	G	K	S	G	Q	D	I	L	R	T	N	N	A	F	E	Y	A	V	G	V	D	A	A	S	N	P	K	L	V	P	L	K	D	L	D	A	P	K	V	E	P	S	K	L	.	.	N	S	K	K	V	V	E	L	M	T	E	A
Template Known Secondary structure			B	T	T		S	S													S										S	S	S			B			B	T	T					T	T	S			G	G	G	S							G	G	G		.	.												T
Template Predicted Secondary structure																																																																	.	.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.			.	.	300	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions