Job Description P31550 Confidence 79.95% Date Thu Jan 5 11:48:11 GMT 2012 Rank 106 Aligned Residues 172 % Identity 9% Template d1us5a_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.5

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		A	K	P	V	L	T	V	Y	T	Y	D	S	F	A	A	D	W	G	P	G	P	V	V	K	K	A	F	E	A	D	C	.	N	C	E	L	K	L	V	A	L	E	D	G	V	S	L	L	N	R	L	R	M	E	G	K	N	S	K	A	D	V	V	L	G	L	D	N	N	L	L	D	A	A	S	K	T	G	L	F
Query Conservation																																	.
Alig confidence																																	.																					.	.	.	.
Template Conservation																																																						.	.	.	.
Template Sequence		A	Q	E	F	I	T	I	G	S	G	S	T	T	G	V	Y	F	P	V	A	T	G	I	A	K	L	V	N	D	A	N	V	G	I	R	A	N	A	R	S	T	G	G	S	V	A	N	I	N	A	I	N	.	.	.	.	A	G	E	F	E	M	A	L	A	Q	N	D	I	A	Y	Y	A	Y	Q	G	C	C	I	P
Template Known Secondary structure													T	T	S	S																T	S	S									S											.	.	.	.	T	T	S		S															T		S	S	T
Template Predicted Secondary structure																																																						.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.					.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	S	G	V	A	A	D	A	V	N	V	P	G	G	W	N	N	D	T	F	V	P	F	D	Y	G	Y	F	A	F	V	Y	D	K	N	K	L	K	N	P	P	Q	S	L	K	E	L	V	E	S	D	Q	N	W	R	V	I	Y	Q	D	P	R	T	S	T	P	G	L	G	L	L	L	W	M	Q	K	V	Y	G
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.																			.	.	.										.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.																			.	.	.										.	.	.	.	.
Template Sequence		A	F	E	G	K	P	V	K	T	I	.	.	.	.	.	.	.	.	R	A	L	A	A	L	Y	P	E	V	V	H	V	V	A	R	K	D	.	.	.	A	G	I	R	T	V	A	D	L	.	.	.	.	.	K	G	K	R	V	V	V	G	D	V	G	S	G	T	E	Q	N	A	R	Q	I	L	E	A	Y	G	L
Template Known Secondary structure		T	T	T	T				T	T		.	.	.	.	.	.	.	.																	T	T	.	.	.	S	S		S	S	G	G	G	G	.	.	.	.	.	T	T	S							T	T														T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.																			.	.	.										.	.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.									.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120				.	.	.	.	.	.	.	.	.						130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	A	P	Q	A	W	Q	K	L	A	K	K	T	V	T	V	T	K	G	W	S	E	A	Y	G	L	F	L	K	G	E	S	D	L	V	L	S	Y	T	T
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.
Template Sequence		T	F	D	D	.	.	.	.	.	.	.	.	L	G	Q	A	I	R	V	S	A	S	Q	G	I	Q	L	M	Q	D	K	R	A	D	A	L	F	Y	T	V	G
Template Known Secondary structure			G	G	G	.	.	.	.	.	.	.	.	S	S																T	T	S		S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.
Template SS confidence
		157	.	.	160									.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions