Job Description P31550 Confidence 99.95% Date Thu Jan 5 11:48:11 GMT 2012 Rank 61 Aligned Residues 286 % Identity 14% Template d1sbpa_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.70

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.					.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.								.
Query SS confidence																														.	.	.	.								.
Query Sequence		V	L	T	V	Y	T	Y	D	S	F	A	A	D	W	G	P	G	P	V	V	K	K	A	F	E	A	D	C	.	.	.	.	N	C	E	L	K	L	V	.	A	L	E	D	G	V	S	L	L	N	R	L	R	M	E	G	K	N	S	K	A	D	V	V	L	G	L	D	N	N	L	L	D	A	A	S	K	T	G	L
Query Conservation																														.	.	.	.								.
Alig confidence											.	.	.																	.	.	.	.								.														.	.	.
Template Conservation											.	.	.																																										.	.	.
Template Sequence		Q	L	L	N	V	S	Y	D	P	.	.	.	T	R	E	L	Y	E	Q	Y	N	K	A	F	S	A	H	W	K	Q	E	T	G	D	N	V	V	I	D	Q	S	H	G	G	S	G	K	Q	A	T	S	V	I	.	.	.	N	G	I	E	A	D	T	V	T	L	A	L	A	Y	D	V	N	A	I	A	E	R	G	R
Template Known Secondary structure									S	T	.	.	.	T																				S										S											.	.	.	T	T				S					S	S										T	T	S
Template Predicted Secondary structure											.	.	.																																										.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.				.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.				.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	K	S	G	V	A	A	D	A	V	N	V	P	G	G	W	N	N	D	T	F	V	P	F	D	Y	G	Y	F	A	F	V	Y	D	K	N	K	L	K	N	P	P	Q	S	L	K	E	L	V	E	S	D	Q	N	W	R	V	I	Y	Q	D	P	R	T	S	T	P	G	L	G	L	L	L	W	M	Q	K	V	Y
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.																			.
Template Conservation											.	.	.	.	.	.	.	.	.	.																			.
Template Sequence		I	D	K	N	W	I	K	R	L	.	.	.	.	.	.	.	.	.	.	P	D	D	S	A	P	Y	T	S	T	I	V	F	L	V	R	K	G	.	N	P	K	Q	I	H	D	W	N	D	L	I	K	P	G	V	S	V	I	T	P	N	P	K	S	S	G	G	A	R	W	N	Y	L	A	A	W	G	Y	A	L	H
Template Known Secondary structure		S		T	T	G	G	G	G	S	.	.	.	.	.	.	.	.	.	.						S			B								T	T	.		T	T				S	G	G	G	G	G	S	T	T								T	T	T
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.																			.
Template SS confidence
		78	.	80	.	.	.	.	.	.											.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		176	.						.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.				240	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.																							.																																									.	.	.
Query SS confidence				.	.	.	.	.																							.																																									.	.	.
Query Sequence		G	D	.	.	.	.	.	D	A	P	Q	A	W	Q	K	L	A	K	K	T	V	T	V	T	K	G	W	S	E	.	A	Y	G	L	F	L	K	G	E	S	D	L	V	L	S	Y	T	T	S	P	A	Y	H	I	L	E	E	K	K	D	N	Y	A	A	A	N	F	S	E	G	.	.	.	H	Y	L	Q	V	E	V
Query Conservation				.	.	.	.	.																							.																																									.	.	.
Alig confidence				.	.	.	.	.																							.																																									.	.	.
Template Conservation
Template Sequence		H	N	N	N	D	Q	A	K	A	E	D	F	V	K	A	L	F	K	N	V	E	V	L	D	S	G	A	R	G	S	T	N	T	F	V	E	R	G	I	G	D	V	L	I	A	W	E	N	E	A	L	L	A	T	N	E	L	G	K	D	K	F	E	I	V	T	P	S	E	S	I	L	A	E	P	T	V	S	V	V
Template Known Secondary structure			T	T	T															T						S	S										T	S				S															T	T	T	T	T	T							S					B
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.					.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure																																																											.	.	.	.
Query SS confidence																																																											.	.	.	.
Query Sequence		A	A	R	T	A	A	S	K	Q	P	E	L	A	Q	K	F	L	Q	F	M	V	S	P	A	F	Q	N	A	I	P	T	G	N	W	M	Y	P	V	A	N	V	T	L	P	A	G	F	E	K	L	T	K	P	A	T	T	L	.	.	.	.	E	F	T	P	A	E	V	A	A	Q	R	Q	A	W	I	S	E	W	Q
Query Conservation																																																											.	.	.	.
Alig confidence																																	.																										.	.	.	.
Template Conservation																																	.
Template Sequence		D	K	V	V	E	K	K	D	T	K	A	V	A	E	A	Y	L	K	Y	L	Y	S	P	E	G	Q	E	I	A	A	K	.	N	F	Y	R	P	R	D	A	D	V	A	K	K	Y	D	D	A	F	P	K	L	K	L	F	T	I	D	E	V	F	G	G	W	A	K	A	Q	K	D	H	F	A	D	G	G	T	F	D
Template Known Secondary structure									T											G	G	G	S										.	T	T				S								T	G	G	G	S													S	S									T	S	T	T	S
Template Predicted Secondary structure																																	.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.		.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		323	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		306	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions