Job Description P31550 Confidence 21.59% Date Thu Jan 5 11:48:11 GMT 2012 Rank 134 Aligned Residues 208 % Identity 10% Template d1pb7a_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.35

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.																	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	V	K	K	A	F	E	A	D	C	N	C	E	L	K	L	V	A	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	V	S	L	L	N	R	L	R	M	E	G	K	N	S	K	A	D	V	V	L	G	L	D	N	N	L	L	D	A	A	S	K	T	G	L	F	A	K	S	G	V	A
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.																									.	.	.	.	.
Template Conservation																																																	.	.	.	.																									.	.	.	.	.
Template Sequence		D	L	L	I	K	L	A	R	T	M	N	F	T	Y	E	V	H	L	V	A	D	G	K	F	G	T	Q	E	R	V	N	N	S	N	K	K	E	W	N	G	M	M	G	E	L	L	S	.	.	.	.	G	Q	A	D	M	I	V	A	P	L	T	I	N	N	E	R	A	Q	Y	I	E	F	S	K	.	.	.	.	.
Template Known Secondary structure												T									T	T										T	T	S	S														.	.	.	.	T	S		S				S	S		B							T	T					S	.	.	.	.	.
Template Predicted Secondary structure																																																	.	.	.	.																									.	.	.	.	.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.					.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	A	V	N	V	P	G	G	W	N	N	D	T	F	V	P	F	D	Y	G	Y	F	A	F	V	Y	D	K	N	K	L	K	N	P	P	Q	S	L	K	E	L	V	E	S	D	Q	N	W	R	V	I	Y	Q	D	P	R	T	S	T	P	G	L	G	L	L	L	W	M	Q	K	V	Y	G	D	D	A	P	Q	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.																																															.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.																																															.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	F	K	Y	Q	G	L	T	I	L	V	K	K	.	.	.	G	T	R	I	T	G	I	N	D	P	R	L	R	N	P	S	D	K	F	I	Y	A	T	V	K	Q	S	S	V	D	I	Y	F	R	R	Q	V	E	L	S	T	M	Y	R	H	M	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S											T	.	.	.	T					S	T	T						S		B	T	T	B					B	T	T	S								T		G	G	G								.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.																																															.	.
Template SS confidence
																		140	.	.	.	.	.	.	.	.	.	150	.	.				.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	Q	K	L	A	K	K	T	V	T	V	T	K	G	W	S	E	A	Y	G	L	F	L	K	G	E	S	D	L	V	L	S	Y	T	T	S	P	A	Y	H	I	L	E	E	K	K	D	N	Y	A	A	A	N	F	S	E	G	H	Y	L	Q	V	E	V	A	A	R	T	A	A	S	K	Q	P	E	L	A	Q	K	F
Query Conservation
Alig confidence		.	.	.	.	.	.	.																																								.	.	.	.
Template Conservation		.	.	.	.	.	.	.																																								.	.	.	.
Template Sequence		.	.	.	.	.	.	.	E	K	H	N	Y	E	S	A	A	E	A	I	Q	A	V	R	D	N	K	L	H	A	F	I	W	D	S	A	V	L	E	F	E	A	S	Q	K	C	D	.	.	.	.	L	V	T	T	G	E	L	F	F	R	S	G	F	G	I	G	M	R	K	D	S	P	W	K	Q	N	V	S	L	S
Template Known Secondary structure		.	.	.	.	.	.	.	T	T	T		B	S	S										T	T	S		S																	T	T	.	.	.	.					S	S		S											T	T		S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.																																								.	.	.	.
Template SS confidence
									199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.					.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		263	.	.	.		.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		L	Q	F	M	.	V	S	P	A	F	Q	N	A	I	P	T	G	N	W	M	Y	P	V	A	N	V
Query Conservation						.
Alig confidence						.
Template Conservation
Template Sequence		I	L	K	S	H	E	N	G	F	M	E	D	L	D	K	T	W	V	R	Y	Q	E	C	D	S	G
Template Known Secondary structure								S	S										T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions