Job Description P31550 Confidence 21.55% Date Thu Jan 5 11:48:11 GMT 2012 Rank 136 Aligned Residues 212 % Identity 15% Template c3qslA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative exported protein; PDBTitle: structure of cae31940 from bordetella bronchiseptica rb50 Resolution 2.00 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		A	K	P	V	L	T	V	Y	T	Y	D	S	F	A	A	D	W	G	.	P	G	P	V	V	K	K	A	F	E	A	D	C	N	C	E	L	K	L	V	A	L	E	D	G	V	S	L	L	N	R	L	R	M	E	G	K	N	S	K	A	D	V	V	L	G	L	D	N	N	L	L	D	A	A	S	K	T	G	L	F
Query Conservation																				.
Alig confidence																				.																																	.	.	.	.
Template Conservation																																																					.	.	.	.
Template Sequence		E	K	A	K	V	Q	I	A	V	G	G	K	P	L	I	Y	Y	L	P	L	T	I	A	E	V	K	G	F	F	K	D	E	G	L	D	V	S	I	A	D	F	A	G	G	S	K	A	L	Q	A	V	.	.	.	.	V	G	G	S	A	D	V	V	S	G	A	F	E	H	T	L	S	L	Q	A	K	G	Q	F	Y
Template Known Secondary structure		S		S							S		T	T	S	G	G	G									T	T					T	T									S	S									.	.	.	.		T	T	S		S						T									T	T
Template Predicted Secondary structure																																																					.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.					.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	S	G	V	A	A	D	A	V	N	V	P	G	G	W	N	N	D	T	F	V	P	F	D	Y	G	Y	F	A	F	V	Y	D	K	N	K	L	K	N	P	P	Q	S	L	K	E	L	V	E	S	D	Q	N	W	R	V	I	Y	Q	D	P	R	T	S	T	P	G	L	G	L	L	L	W	M	Q	K	V	Y	G
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.
Template Sequence		R	A	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	Q	G	R	A	P	X	I	G	V	G	V	S	K	.	.	.	.	.	.	K	N	L	P	G	Y	K	G	P	A	D	L	K	G	R	K	I	G	V	T	A	P	G	S	S	T	N	X	V	V	N	F	F	L	A	K	H	G	L
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	B	S	S									T	.	.	.	.	.	.	T	T		T	T			S	G	G	G	G	T	T						S	S	T	T	S													T	T
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.
Template SS confidence
		107	.	.																		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.							.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.							.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure																																																																.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.
Query Sequence		D	D	A	P	Q	A	W	Q	K	L	A	K	K	T	V	T	V	T	K	G	W	S	E	A	Y	G	L	F	L	K	G	E	S	D	L	V	L	S	Y	T	T	S	P	A	Y	H	I	L	E	E	K	K	D	N	Y	A	A	A	N	F	S	E	.	.	.	.	.	.	G	H	Y	L	Q	V	E	V	A	A	R	T
Query Conservation																																																																.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.																																																					.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.
Template Sequence		K	A	.	.	.	.	.	.	.	.	S	D	V	S	F	I	G	V	G	A	G	A	G	A	V	T	A	L	R	S	G	Q	I	D	A	I	S	N	T	D	P	V	V	S	X	L	E	T	S	G	D	I	Q	I	I	V	D	T	R	T	L	K	D	T	K	E	I	F	G	G	N	X	P	A	G	C	L	Y	A	P
Template Known Secondary structure			G	.	.	.	.	.	.	.	.	G	G	S							S	S										T	S		S						T	T								T	T									S	S									S	S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.
Template SS confidence
		164	.									.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		251	.			.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		A	A	.	.	S	K	Q	P	E	L	A	Q	K	F	L	Q
Query Conservation				.	.
Alig confidence				.	.
Template Conservation
Template Sequence		Q	A	F	V	D	A	N	P	N	T	A	Q	A	L	T	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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