Job Description P31550 Confidence 100.00% Date Thu Jan 5 11:48:11 GMT 2012 Rank 43 Aligned Residues 276 % Identity 17% Template c3k02A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:acarbose/maltose binding protein gach; PDBTitle: crystal structures of the gach receptor of streptomyces glaucescens2 gla.o in the unliganded form and in complex with acarbose and an3 acarbose homolog. comparison with acarbose-loaded maltose binding4 protein of salmonella typhimurium. Resolution 1.55 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		K	P	V	L	T	V	Y	T	Y	D	S	F	A	A	D	W	G	P	G	P	V	V	K	K	A	F	E	A	D	C	.	N	C	E	L	K	L	V	A	L	E	D	G	V	S	L	L	N	R	L	R	M	E	G	K	N	S	K	A	D	V	V	L	G	L	D	N	N	L	L	D	A	A	S	K	T	G	L	F	A
Query Conservation																																.
Alig confidence													.																			.
Template Conservation													.
Template Sequence		S	G	T	V	T	F	W	D	T	S	N	.	E	A	E	K	A	T	Y	Q	A	L	A	E	G	F	E	K	E	H	P	K	V	D	V	K	Y	V	N	V	P	F	G	E	A	N	A	K	F	K	N	A	A	G	G	N	S	G	A	P	D	V	M	R	T	E	V	A	W	V	A	D	F	A	S	I	G	Y	L	A
Template Known Secondary structure													.	T	T	T																T	T																							T	T	S	S			S						T	T								T	T		B
Template Predicted Secondary structure													.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		98	.	100	.											.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150										.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.	.
Query Sequence		K	S	G	V	.	.	.	.	.	.	.	.	.	.	A	A	D	A	V	N	V	P	G	G	W	N	N	D	T	F	V	P	F	D	Y	G	Y	F	A	F	V	Y	D	K	N	K	L	K	N	P	P	Q	S	L	K	E	L	V	E	S	D	Q	N	.	.	.	.	.	.	.	.	.	W	R	V	I	Y	Q	D	P
Query Conservation						.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	L	D	G	T	P	A	L	D	D	G	S	D	H	L	P	Q	A	A	A	S	T	R	Y	E	G	K	T	Y	A	V	P	Q	V	I	D	T	L	A	L	F	Y	N	K	E	L	L	T	K	A	G	V	E	V	P	G	S	V	A	E	L	K	T	A	A	A	E	I	T	E	K	T	G	A	T	G	L	Y	L	R
Template Known Secondary structure				T	T	S	T	T		S	S	G	G	G	B							T	T			T	T																									T					S	B																S
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.																.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.				.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Query Sequence		R	T	S	T	P	G	L	G	L	L	L	W	M	Q	K	V	Y	G	D	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	Q	A	W	Q	K	L	A	K	K	T	V	T	V	T	K	G	W	.	.	.	S	E	A	Y	G	L	F	L	K	G	E	S	D	L	V	L	S	Y	T	T	S	P	A
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Template Conservation
Template Sequence		G	D	D	P	Y	W	F	L	P	Y	L	Y	G	E	G	G	D	L	V	D	E	K	N	K	T	V	T	V	D	D	E	A	G	V	R	A	Y	R	V	I	K	D	L	V	D	S	K	A	A	I	T	D	A	S	D	G	W	N	N	M	Q	N	A	F	K	S	G	K	V	A	M	M	V	N	G	P	W	A	I	E
Template Known Secondary structure			S		G	G	G	G							T	T			S			T	T	T	T				T	T	S																T	T	S					S	S												T	T	S								G	G	G
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		221	.	.	.	.	.	.				.	.	230	.	.	.	.	.	.	.	.	.						240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure									.	.	.													.	.	.	.	.
Query SS confidence									.	.	.													.	.	.	.	.
Query Sequence		Y	H	I	L	E	E	K	.	.	.	K	D	N	Y	A	A	A	N	F	S	E	G	.	.	.	.	.	H	Y	L	Q	V	E	V	A	A	R	T	A	A	S	K	Q	P	E	L	A	Q	K	F	L	Q	F	M	V	S	P	A	F	Q	N	A	I	P	T	G	N	W	M	Y	P	V	A	N	V	T	L	P	A	G
Query Conservation									.	.	.													.	.	.	.	.
Alig confidence									.	.	.													.	.	.	.	.
Template Conservation
Template Sequence		D	V	K	A	G	A	R	F	K	D	A	G	N	L	G	V	A	P	V	P	A	G	S	A	G	Q	G	S	P	Q	G	G	W	N	L	S	V	Y	A	G	S	K	N	L	D	A	S	Y	A	F	V	K	Y	M	S	S	A	K	V	Q	Q	Q	T	T	E	K	L	S	L	L	P	T	R	T	S	V	Y	E	V	P
Template Known Secondary structure					T	S	G	G	G	S	S	G	G	G								B		S	S					B									B	T	T		S													T	S																S	B	G	G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		293	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	E	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		338	.	340

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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