Job Description P31550 Confidence 84.48% Date Thu Jan 5 11:48:11 GMT 2012 Rank 103 Aligned Residues 206 % Identity 15% Template c3e4rA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:nitrate transport protein; PDBTitle: crystal structure of the alkanesulfonate binding protein2 (ssua) from the phytopathogenic bacteria xanthomonas3 axonopodis pv. citri bound to hepes Resolution 2.01 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		V	F	A	K	P	V	L	T	V	Y	T	Y	D	S	F	A	A	D	W	G	P	G	P	V	V	K	K	A	F	E	A	D	C	.	N	C	E	L	K	L	V	A	L	E	D	G	V	S	L	L	N	R	L	R	M	E	G	K	N	S	K	A	D	V	V	L	G	L	D	N	N	L	L	D	A	A	S	K	T	G
Query Conservation																																			.
Alig confidence																										.	.								.																				.	.	.	.
Template Conservation																										.	.																												.	.	.	.
Template Sequence		A	A	E	P	A	Q	L	R	I	G	Y	Q	K	A	V	S	S	L	V	L	A	K	Q	H	.	.	R	L	L	E	Q	R	F	P	R	T	K	I	T	W	V	E	F	P	A	G	P	Q	L	L	E	A	L	.	.	.	.	N	V	G	S	I	D	L	G	G	A	G	D	I	P	P	L	F	A	Q	A	A	G	A
Template Known Secondary structure						S								T	T										T	.	.	T							T	T	S								S	S									.	.	.	.		T	T	S		S						S									T	T
Template Predicted Secondary structure																										.	.																												.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.			.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.					.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	A	K	S	G	V	A	A	D	A	V	N	V	P	G	G	W	N	N	D	T	F	V	P	F	D	Y	G	Y	F	A	F	V	Y	D	K	N	K	L	K	N	P	P	Q	S	L	K	E	L	V	E	S	D	Q	N	W	R	V	I	Y	Q	D	P	R	T	S	T	P	G	L	G	L	L	L	W	M	Q	K	V
Query Conservation
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.										.	.	.	.	.								.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.										.	.	.	.	.								.	.
Template Sequence		D	L	L	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	W	V	P	P	T	P	K	A	E	T	I	L	V	P	S	K	.	.	.	S	A	L	R	T	V	A	D	L	.	.	.	.	.	K	G	K	R	I	A	F	.	.	Q	K	G	S	S	A	H	N	L	L	L	R	V	L	A	K
Template Known Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								G	G	G							T	T	.	.	.					S	G	G	G	G	.	.	.	.	.	T	T						.	.		T	T	S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.										.	.	.	.	.								.	.
Template SS confidence
		99	100	.	.																	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120				.	.	.	.	.	.	.	.	.						130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		Y	G	D	D	A	P	Q	A	W	Q	K	L	A	K	K	T	V	T	V	T	K	G	W	S	E	A	Y	G	L	F	L	K	G	E	S	D	L	V	L	S	Y	T	T	S	P	A	Y	H	I	L	E	E	K	K	D	N	Y	A	A	A	N	F	S	E	G	H	Y	L	Q	V	E	V	A	A	R	T	A	A	.	.
Query Conservation																																																																																.	.
Alig confidence						.	.	.	.	.	.	.	.																																										.	.	.																							.	.
Template Conservation						.	.	.	.	.	.	.	.																																										.	.	.
Template Sequence		S	G	L	S	.	.	.	.	.	.	.	.	M	R	D	I	T	P	L	Y	L	S	P	A	N	A	R	A	A	F	A	A	G	Q	V	D	A	W	A	I	W	D	P	W	Y	S	A	L	T	L	D	G	S	.	.	.	A	R	L	L	A	N	G	E	G	L	G	L	T	G	G	F	F	L	S	S	R	R	Y	A
Template Known Secondary structure		T	T			.	.	.	.	.	.	.	.	G	G	G	S																T	T			S						T	T								T	T	S	.	.	.							S	T	T	S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.																																										.	.	.
Template SS confidence
		153	.	.	.									.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.				.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		253	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	Q	P	E	L	A	Q	K	F	L	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	A	W	G	P	F	V	Q	Q	V	M	G
Template Known Secondary structure				T
Template Predicted Secondary structure
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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