Job Description P31550 Confidence 100.00% Date Thu Jan 5 11:48:11 GMT 2012 Rank 38 Aligned Residues 270 % Identity 16% Template c2xd3A_ PDB info PDB header:sugar binding protein Chain: A: PDB Molecule:maltose/maltodextrin-binding protein; PDBTitle: the crystal structure of malx from streptococcus pneumoniae2 in complex with maltopentaose. Resolution 2.00 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	V	Y	T	Y	D	S	F	A	A	D	W	G	P	G	P	V	V	K	K	A	F	E	A	D	C	N	C	E	L	K	L	V	A	L	E	D	G	V	S	L	L	N	R	L	R	M	E	G	K	N	S	K	A	D	V	V	L	G	L	D	N	N	L	L	D	A	A	S	K	T	G	L	F	A	K	S	G	V
Query Conservation
Alig confidence										.	.	.																										.
Template Conservation										.	.	.																										.
Template Sequence		L	T	V	Y	V	D	E	G	.	.	.	Y	K	S	Y	I	E	E	V	A	K	A	Y	E	K	E	A	G	V	K	V	T	L	K	T	G	.	D	A	L	G	G	L	D	K	L	S	L	D	N	Q	N	G	N	V	P	D	V	M	M	A	P	Y	D	R	V	G	S	L	G	S	D	G	Q	L	S	E	V	K	L
Template Known Secondary structure								G	G	.	.	.	G															S	S									.								T								S				S															T	T		B
Template Predicted Secondary structure										.	.	.																										.
Template SS confidence
		43	.	.	.	.	.	.	50				.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
									102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.								.	160	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																																																										.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.																																																										.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	A	A	D	A	V	N	V	P	G	G	W	N	N	D	T	F	V	P	F	D	Y	G	Y	F	A	F	V	Y	D	K	N	K	L	K	N	P	P	Q	S	L	K	E	L	V	E	S	D	Q	N	W	R	V	I	Y	Q	D	P	.	.	.	.	.	.	.	R	T	S	T	P	G	L	G	L
Query Conservation		.	.	.	.	.	.	.																																																										.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																																																										.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	D	G	A	K	T	D	D	T	T	K	S	L	V	T	A	A	N	G	K	V	Y	G	A	P	A	V	I	E	S	L	V	M	Y	Y	N	K	D	L	V	K	D	A	P	K	T	F	A	D	L	E	N	L	A	K	D	S	K	Y	A	F	A	G	E	D	G	K	T	T	A	F	L	A	D	W	T	N	F	Y	Y
Template Known Secondary structure			G	G	G											B		T	T			B																T	T	T		S	S				B										S	G	G	G	B		T	T	S	T	T		B		S					T	T	S
Template Predicted Secondary structure
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		168	.	170	.	.	.	.	.	.																						.	.	.	180	.	.	.	.	.	.	.	.					.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Query Sequence		L	L	W	M	Q	K	V	Y	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	D	A	P	Q	A	W	Q	K	L	A	K	.	.	.	.	K	T	V	T	V	T	K	G	W	S	E	A	Y	G	L	F	L	K	G	E	S	D	L	V	L	S	Y	T	T	S	P	A	Y	H
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Template Conservation
Template Sequence		T	Y	G	L	L	A	G	N	G	A	Y	V	F	G	Q	N	G	K	D	A	K	D	I	G	L	A	N	D	G	S	I	V	G	I	N	Y	A	K	S	W	Y	E	K	W	P	K	G	M	Q	D	T	E	G	A	G	N	L	I	Q	T	Q	F	Q	E	G	K	T	A	A	I	I	D	G	P	W	K	A	Q	A	F
Template Known Secondary structure									T	T									T							T	T	S															T	T	S		G	G	G	G		S	S												T	T			S						G	G	G
Template Predicted Secondary structure
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.						240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.
Query SS confidence																			.	.	.	.	.
Query Sequence		I	L	E	E	K	K	D	N	Y	A	A	A	N	F	S	E	G	.	.	.	.	.	H	Y	L	Q	V	E	V	A	A	R	T	A	A	S	K	Q	P	E	L	A	Q	K	F	L	Q	F	M	V	S	P	A	F	Q	N	A	I	P	T	G	N	W	M	Y	P	V	A	N	V	T	L	P	A	G	F	E	K
Query Conservation																			.	.	.	.	.
Alig confidence																			.	.	.	.	.
Template Conservation
Template Sequence		K	D	A	K	V	N	Y	G	V	A	T	I	P	T	L	P	N	G	K	E	Y	A	A	F	G	G	G	K	A	W	V	I	P	Q	A	V	K	N	L	E	A	S	Q	K	F	V	D	F	L	V	A	T	E	Q	Q	K	V	L	Y	D	K	T	N	E	I	P	A	N	T	E	A	R	S	Y	A	E	G	K
Template Known Secondary structure				T	T										B		T	T	S															B	T	T		S														S																S	S
Template Predicted Secondary structure
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions