Job Description P31550 Confidence 99.96% Date Thu Jan 5 11:48:11 GMT 2012 Rank 58 Aligned Residues 263 % Identity 11% Template c2uvgA_ PDB info PDB header:sugar-binding protein Chain: A: PDB Molecule:abc type periplasmic sugar-binding protein; PDBTitle: structure of a periplasmic oligogalacturonide binding2 protein from yersinia enterocolitica Resolution 2.2 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		V	L	T	V	Y	T	Y	D	S	F	A	A	D	W	G	P	G	P	V	V	K	K	A	F	E	A	D	C	.	N	C	E	L	K	L	V	A	L	E	D	G	V	S	L	L	N	R	L	R	M	E	G	K	N	S	K	A	D	V	V	L	G	L	D	N	N	L	L	D	A	A	S	K	T	G	L	F	A	K	S
Query Conservation																														.
Alig confidence											.																			.														.
Template Conservation											.																																	.
Template Sequence		N	L	R	M	S	W	W	G	G	.	N	G	R	H	E	V	T	L	K	A	L	E	E	F	H	K	E	H	P	N	I	N	V	K	A	E	Y	T	G	W	D	G	.	H	L	S	R	L	T	T	Q	I	A	G	G	T	E	P	D	V	M	Q	T	N	W	N	W	L	P	I	F	S	K	D	G	T	G	F	Y	N
Template Known Secondary structure											.																			T	T										S	T	T	.											T	T				S						T	T							T	T	S		S	B
Template Predicted Secondary structure											.																																	.
Template SS confidence
		29	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		100	.												.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.											150	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	V	.	.	.	.	.	.	.	.	.	.	.	A	A	D	A	V	N	V	P	G	G	W	N	N	D	T	F	V	P	F	D	Y	G	Y	F	A	F	V	Y	D	K	N	K	L	K	N	P	P	Q	S	L	K	E	L	V	E	S	D	Q	.	.	.	.	.	.	.	.	.	.	N	W	R	V	I	Y	Q	D	P
Query Conservation				.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	F	S	V	K	E	Q	L	D	L	A	Q	F	D	P	K	E	L	Q	Q	T	T	V	N	G	K	L	N	G	I	P	I	S	V	T	A	R	I	F	Y	F	N	D	A	T	W	A	K	A	G	L	E	Y	P	K	T	W	D	E	L	L	A	A	G	Q	V	F	K	E	K	L	G	D	Q	Y	Y	P	V	V	L
Template Known Secondary structure		G	G	G	G	T	T	T	S		G	G	G	S								T			T	T																									T					S	S															T		T	T		B	S		B
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.																			.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.								.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.
Query Sequence		R	T	S	T	P	G	L	G	L	L	L	W	M	Q	K	V	Y	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	D	A	P	Q	A	W	Q	K	L	A	K	K	T	V	T	V	T	K	.	.	.	.	.	.	.	G	W	S	E	A	Y	G	L	F	L	K	G	E	S	D	L	V	L
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	H	Q	D	T	L	A	L	I	R	S	Y	M	T	Q	K	Y	N	I	P	T	I	D	E	A	N	K	K	F	A	Y	S	P	E	Q	W	V	E	F	F	T	M	Y	K	T	M	V	D	N	H	V	M	P	S	T	K	Y	Y	A	S	F	G	K	S	N	M	Y	E	M	K	P	W	N	G	E	W	A	G	T	Y
Template Known Secondary structure																						S			T	T	T	T																						T	T	S	S								T	T		S	S		G	G	G	S	T	T				S	B
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.										240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.
Query Sequence		S	Y	T	T	S	P	A	Y	H	I	L	E	E	K	K	D	N	Y	A	A	A	N	F	S	E	G	.	.	.	.	.	.	.	.	.	H	Y	L	Q	V	E	V	A	A	R	T	A	A	S	K	Q	P	E	L	A	Q	K	F	L	Q	F	M	V	S	P	A	F	Q	N	A	I	P	T	G	N	W	M	Y	P	V
Query Conservation																												.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	W	N	S	T	I	T	K	Y	S	D	N	L	T	K	P	A	K	L	V	L	G	P	Y	P	M	L	P	G	A	K	D	A	G	L	F	F	K	P	A	Q	M	L	S	I	G	K	S	T	K	H	P	Q	E	S	A	M	L	I	N	F	L	L	N	S	K	E	G	V	E	L	G	L	E	R	G	V	P	L	S
Template Known Secondary structure				G	G	G							T	S		T	T												T	T		S															B	S			S															S							T	T	T	T	S	S	B		S
Template Predicted Secondary structure
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
		285
Predicted Secondary structure
Query SS confidence
Query Sequence		A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		349

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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