Job Description P31550 Confidence 50.99% Date Thu Jan 5 11:48:11 GMT 2012 Rank 115 Aligned Residues 202 % Identity 16% Template c2ql3G_ PDB info PDB header:transcription Chain: G: PDB Molecule:probable transcriptional regulator, lysr family protein; PDBTitle: crystal structure of the c-terminal domain of a probable lysr family2 transcriptional regulator from rhodococcus sp. rha1 Resolution 2.05 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																																.
Query SS confidence																																.
Query Sequence		K	P	V	L	T	V	Y	T	Y	D	S	F	A	A	D	W	G	P	G	P	V	V	K	K	A	F	E	A	D	C	.	N	C	E	L	K	L	V	A	L	E	D	G	V	S	L	L	N	R	L	R	M	E	G	K	N	S	K	A	D	V	V	L	G	L	D	N	N	L	L	D	A	A	S	K	T	G	L	F	A
Query Conservation																																.
Alig confidence																	.	.														.									.													.	.	.	.																.	.	.	.	.	.	.	.	.
Template Conservation																	.	.																							.													.	.	.	.																.	.	.	.	.	.	.	.	.
Template Sequence		A	G	P	I	A	V	G	C	Y	P	A	L	G	P	T	.	.	I	L	P	S	X	L	Y	A	F	T	A	E	Y	P	R	A	S	V	E	F	R	E	.	D	T	Q	N	R	L	R	T	Q	L	E	G	.	.	.	.	G	E	L	D	V	A	I	V	Y	D	L	D	L	S	P	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											G	G	G	T	T	T	.	.	T													T	T								.													.	.	.	.	T	S		S						S	S	S			S	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.	.																							.													.	.	.	.																.	.	.	.	.	.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.			.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.					.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	G	V	A	A	D	A	V	N	V	P	G	G	W	N	N	D	T	F	V	P	F	D	Y	G	Y	F	A	F	V	Y	D	K	N	K	L	K	N	P	P	Q	S	L	K	E	L	V	E	S	D	Q	N	W	R	V	I	Y	Q	D	P	R	T	S	T	P	G	L	G	L	L	L	W	M	Q	K	V	Y	G	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																												.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																												.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	W	Q	T	V	P	L	X	T	R	E	P	X	V	V	L	G	A	E	H	P	L	A	G	V	D	G	P	V	R	L	A	D	L	A	E	H	P	X	V	L	L	D	A	P	P	S	T	N	H	A	X	D	V	C	R	E	A	G	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S																	T	T	S	T	T	T	T	S		S		B		G	G	G	G	T	T	S								T	T												T	T	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																												.	.	.	.	.
Template SS confidence
																		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		D	A	P	Q	A	W	Q	K	L	A	K	K	T	V	T	V	T	K	G	W	S	E	A	Y	G	L	F	L	K	G	E	S	D	L	V	L	S	Y	T	T	S	P	A	Y	H	I	L	E	E	K	K	D	N	Y	A	A	A	N	F	S	E	G	H	Y	L	.	Q	V	E	V	A	A	R	T	A	A	S	K	Q	P
Query Conservation																																																																			.
Alig confidence		.	.	.	.	.	.	.	.																																	.	.	.																							.
Template Conservation		.	.	.	.	.	.	.	.																																	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	F	A	P	R	V	A	Y	R	T	A	N	F	E	T	A	R	A	F	V	G	R	G	L	G	W	T	L	L	L	Q	R	P	.	.	.	R	V	D	V	T	Y	E	G	L	P	V	V	V	K	P	I	A	E	P	K	P	A	S	V	A	V	V	V	A	W	H	Q	E	A	T	L	S
Template Known Secondary structure		.	.	.	.	.	.	.	.										S												T	S		B				S				.	.	.	S	S		B		T	T	S		B						B		S	S													T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																	.	.	.
Template SS confidence
										223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.				.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		257	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	A	Q	K	F	L	Q	F	M	V	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	V	A	R	A	F	I	R	F	V	T	A
Template Known Secondary structure												T
Template Predicted Secondary structure
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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