Job Description P31550 Confidence 46.08% Date Thu Jan 5 11:48:11 GMT 2012 Rank 122 Aligned Residues 206 % Identity 13% Template c2q89A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:putative abc transporter amino acid-binding protein; PDBTitle: crystal structure of ehub in complex with hydroxyectoine Resolution 2.30 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.					.	.	.					.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.				.	.	.	.
Query SS confidence																		.	.	.	.				.	.	.	.
Query Sequence		V	F	A	K	P	V	L	T	V	Y	T	Y	D	S	F	A	.	.	.	.	A	D	W	.	.	.	.	G	P	G	P	V	V	K	K	A	F	E	A	D	C	N	C	E	L	K	L	V	A	L	E	D	G	V	S	L	L	N	R	L	R	M	E	G	K	N	S	K	A	D	V	V	L	G	L	D	N	N	L	L
Query Conservation																		.	.	.	.				.	.	.	.
Alig confidence																		.	.	.	.				.	.	.	.																																		.	.	.	.
Template Conservation																																																														.	.	.	.
Template Sequence		L	K	E	Q	G	F	A	R	I	A	I	A	N	E	P	P	F	T	A	V	G	A	D	G	K	V	S	G	A	A	P	D	V	A	R	E	I	F	K	R	L	G	V	A	D	V	V	A	S	I	S	E	Y	G	A	M	I	P	G	L	.	.	.	.	Q	A	G	R	H	D	A	I	T	A	G	L	F	M	K	P
Template Known Secondary structure																T	T	T	S				T	T					S													T	T											G	G	G						.	.	.	.		T	T	S		S				S			B
Template Predicted Secondary structure																																																														.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.					.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	A	S	K	T	G	L	F	A	K	S	G	V	A	A	D	A	V	N	V	P	G	G	W	N	N	D	T	F	V	P	F	D	Y	G	Y	F	A	F	V	Y	D	K	N	K	L	K	N	P	P	Q	S	L	K	E	L	V	E	S	D	Q	N	W	R	V	I	Y	Q	D	P	R	T	S	T	P	G	L	G	L
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	R	C	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	Y	S	Q	P	I	L	C	D	A	E	A	F	A	L	K	K	G	N	P	L	G	L	K	S	Y	K	D	I	A	D	N	P	D	A	K	I	G	A	P	G	G	G	T	E	E	K	L	A	L	E	A
Template Known Secondary structure					T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S				S													T	T		T	T				B						T		T	T							T	T	S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.																							.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	W	M	Q	K	V	Y	G	D	D	A	P	Q	A	W	Q	K	L	A	K	K	T	V	T	V	T	K	G	W	S	E	A	Y	G	L	F	L	K	G	E	S	D	L	V	L	S	Y	T	T	S	P	A	Y	H	I	L	E	E	K	K	D	N	Y	A	A	A	N	F	S	E	G	H	Y	L	Q	V	E	V	A
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	D	R	V	I	V	V	P	D	G	Q	S	G	L	K	M	L	Q	D	G	R	I	D	V	Y	S	L	P	V	L	S	I	N	D	L	V	S	K	A	N	D	P	N	V	E	V	L	A	P	V	E	G	A	P	V	Y	C	D	G	A
Template Known Secondary structure		T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G					S	S											T	S		S																	T		T	T						S		B	T						B
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		142	.	.																		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	T	A	A	S	K	Q	P	E	L	A	Q	K	F	L	Q	F	M
Query Conservation
Alig confidence							.	.
Template Conservation							.	.
Template Sequence		A	F	R	K	G	.	.	D	E	A	L	R	D	A	F	D	V	E	L
Template Known Secondary structure					G	G	.	.	G
Template Predicted Secondary structure							.	.
Template SS confidence
		205	.	.	.	.			210	.	.	.	.	.	.	.	.	.	220	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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