Return to main results Retrieve Phyre Job Id

Job DescriptionP63204
Confidence99.63%DateThu Jan 5 12:07:55 GMT 2012
Rank31Aligned Residues58
% Identity26%Templated1yioa1
SCOP infoDNA/RNA-binding 3-helical bundle C-terminal effector domain of the bipartite response regulators GerE-like (LuxR/UhpA family of transcriptional regulators)
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   115....120.........130.........140.........150.........160.........170..
Predicted Secondary structure 












Query SS confidence 

























































Query Sequence  CFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTLGIT
Query Conservation   

 

 


 

  
 





  
 

  

  
   
  

 

   

  
   
Alig confidence 

























































Template Conservation   

  
  

     
 
  


  
 

  

      
  

    
  

  
  
Template Sequence  SLTGREQQVLQLTIRGLMNKQIAGELGIAEVTVKVHRHNIMQKLNVRSLANLVHLVEK
Template Known Secondary structure  TS
TTT

T

TT
SS
Template Predicted Secondary structure 












Template SS confidence 

























































   142.......150.........160.........170.........180.........190.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions