Job Description P63204 Confidence 99.28% Date Thu Jan 5 12:07:55 GMT 2012 Rank 115 Aligned Residues 139 % Identity 9% Template d1qo0d_ SCOP info Flavodoxin-like CheY-like Positive regulator of the amidase operon AmiR Resolution 2.25

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.					.	.	.
Predicted Secondary structure																																																																											.	.	.	.
Query SS confidence																																																																											.	.	.	.
Query Sequence		I	F	L	M	T	K	D	S	F	L	L	Q	G	F	W	Q	L	K	D	N	H	E	M	I	K	I	N	S	L	S	E	I	K	K	V	G	N	K	P	F	K	V	I	I	D	T	Y	H	N	H	I	L	D	E	E	A	I	K	F	L	E	K	L	D	A	E	R	I	I	V	L	A	P	.	.	.	.	Y	H	I
Query Conservation																																																																											.	.	.	.
Alig confidence																																																																											.	.	.	.
Template Conservation
Template Sequence		V	L	V	L	N	P	P	G	E	V	S	D	A	L	V	L	Q	L	I	R	I	G	C	S	V	R	Q	C	W	P	P	P	E	A	F	D	V	P	V	D	V	V	F	T	S	I	F	Q	N	R	H	H	D	E	I	A	A	L	L	A	A	G	T	P	R	T	T	L	V	A	L	V	E	Y	E	S	P	A	V	L
Template Known Secondary structure						S		T	T														T								S			S	S		S	S			S								S	S	T												S		T	T											S
Template Predicted Secondary structure
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.																														.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Query Sequence		S	K	L	K	A	K	A	P	I	Y	F	V	S	R	K	E	S	I	K	N	L	L	E	I	T	Y	G	K	H	L	P	H	K	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Q	L	C	F	S	H	N	Q	.	F	K	I	M	Q	L	I
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation
Template Sequence		S	Q	I	I	E	L	E	C	H	G	V	I	T	Q	P	L	D	A	H	R	V	L	P	V	L	V	S	A	R	R	I	S	E	E	M	A	K	L	K	Q	K	T	E	Q	L	Q	D	R	I	A	G	Q	A	R	I	N	Q	A	K	V	L	L	M	Q	R	H	G	W	D	E	R	E	A	H	Q	H	L	S	R	E
Template Known Secondary structure								T		S					S	S			G	G	G																																															T
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		128	.			130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		L	K	.	.	N	K	N	E	S	N	I	T	S	T	L
Query Conservation				.	.
Alig confidence				.	.
Template Conservation
Template Sequence		A	M	K	R	R	E	P	I	L	K	I	A	Q	E	L
Template Known Secondary structure			T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions