 |
Job Description | P63204 | Confidence | 99.53% | Date | Thu Jan 5 12:07:55 GMT 2012 |
Rank | 55 | Aligned Residues | 107 |
% Identity | 9% | Template | d1dbwa_ |
SCOP info | Flavodoxin-like
| CheY-like
| CheY-related
|
Resolution | 1.60 |
|
 |
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | |
|
. | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | |
|
40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | |
. | . | 70 | . | . | . | . | |
|
Predicted Secondary structure |   |
 |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |
|
|
| . | . |
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
| . |
|
|  |  |  |  |
| . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . |
. |
Query Sequence |   |
I | F | L | M | T | K | D | S | F | L | L | Q | G | F | W | Q | L | K | D | N | . |
. |
H | E | M | I | K | I | N | S | L | S | E | I | K | K | V | G | N | K | . |
. |
P | F | K | V | I | I | D | T | Y | H | N | H | I | L | D | E | E | A | I | K | F | L | E | K | L | D | A | E | . |
R | I | I | V | L | A | P | . |
. |
Query Conservation |   |
|
|
|
|
|
|
|   |   |   |   |   |
|
|   |   |
|
|   |   | . | . |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   | . | . |   |
|   |
|
|
|
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   | . |   |   |
|
|
|   |   | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
| . | . |
Template Conservation |   |
|
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |
Template Sequence |   |
V | H | I | V | D | D | E | E | P | V | R | K | S | L | A | F | M | L | T | M | N | G | F | A | V | K | M | H | Q | S | A | E | A | F | L | A | F | A | P | D | V | R | N | G | V | L | V | T | D | L | R | M | P | D | M | S | G | V | E | L | L | R | N | L | G | D | L | K | I | N | I | P | S | I | V | I | T | G | H | G |
Template Known Secondary structure |   |
 |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  | S |
|  |  |  |  |  |  |  | G | G | G |
|
| S |  |  |  |  |  |  |
|
| S | T | T | S |
|  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
|  |  |  |  |  |
| T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
  |
  |   |
|
|
75 | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
Y | H | I | S | K | L | K | A | K | A | P | I | Y | F | V | S | R | K | E | S | I | K | N | L | L | E | I | T | Y | G | K | H | L | P |
Query Conservation |   |
. | . |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |
Alig confidence |   |
. | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|
|   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
Template Sequence |   |
D | V | P | M | A | V | E | A | M | K | A | G | A | V | D | F | I | E | K | P | F | E | D | T | V | I | I | E | A | I | E | R | A | S | E | H |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  | S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|