Return to main results Retrieve Phyre Job Id

Job DescriptionP63204
Confidence96.68%DateThu Jan 5 12:07:55 GMT 2012
Rank154Aligned Residues57
% Identity23%Templatec3p7nB_
PDB info PDB header:dna binding proteinChain: B: PDB Molecule:sensor histidine kinase; PDBTitle: crystal structure of light activated transcription factor el222 from2 erythrobacter litoralis
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   115....120.........130.........140.........150.........160.........170.
Predicted Secondary structure 












Query SS confidence 
























































Query Sequence  CFSHNQFKIMQLILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSDIVTLGI
Query Conservation   

 

 


 

  
 





  
 

  

  
   
  

 

   

  
  
Alig confidence 
























































Template Conservation          
                
               


 

 


  

  
Template Sequence  TLSPRQLEVTTLVASGLRNKEVAARLGLSEKTVKMHRGLVMEKLNLKTSADLVRIAV
Template Known Secondary structure  TS
TT

T

TT

S
Template Predicted Secondary structure 













Template SS confidence 
























































   162.......170.........180.........190.........200.........210........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions