Job Description P63204 Confidence 60.08% Date Thu Jan 5 12:07:55 GMT 2012 Rank 396 Aligned Residues 106 % Identity 13% Template c2vycA_ PDB info PDB header:lyase Chain: A: PDB Molecule:biodegradative arginine decarboxylase; PDBTitle: crystal structure of acid induced arginine decarboxylase2 from e. coli Resolution 2.4 Å

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		2	.	.	.	.	.	.						.	10	.	.	.	.	.	.	.	.	.	20	.						.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.				40	.	.	.	.	.	.	.	.	.	50	.					.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure									.	.	.	.	.														.	.	.	.	.																			.	.	.													.	.	.	.
Query SS confidence									.	.	.	.	.														.	.	.	.	.																			.	.	.													.	.	.	.
Query Sequence		I	F	L	M	T	K	D	.	.	.	.	.	S	F	L	L	Q	G	F	W	Q	L	K	D	N	.	.	.	.	.	H	E	M	I	K	I	N	S	L	S	E	I	K	K	V	G	N	K	.	.	.	P	F	K	V	I	I	D	T	Y	H	N	H	.	.	.	.	I	L	D	E	E	A	I	K	F	L	E	K	L
Query Conservation									.	.	.	.	.														.	.	.	.	.																			.	.	.													.	.	.	.
Alig confidence									.	.	.	.	.														.	.	.	.	.																			.	.	.													.	.	.	.
Template Conservation
Template Sequence		V	L	I	V	E	S	E	F	L	H	Q	D	T	W	V	G	N	A	V	E	R	L	A	D	A	L	S	Q	Q	N	V	T	V	I	K	S	T	S	F	D	D	G	F	A	I	L	S	S	N	E	A	I	D	C	L	M	F	S	Y	Q	M	E	H	P	D	E	H	Q	N	V	R	Q	L	I	G	K	L	H	E	R
Template Known Secondary structure								T	T	S	T	T	S																	T	T							S	S									T	T	T				S										S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		65	.	.		.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.					.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure					.												.							.	.	.	.
Query SS confidence					.												.							.	.	.	.
Query Sequence		D	A	E	.	R	I	I	V	L	A	P	Y	H	I	S	.	K	L	K	A	K	A	.	.	.	.	P	I	Y	F	V	S	R	K	E	S	I	K	N	L	L	E	I	T	Y	G	K	H	L
Query Conservation					.												.							.	.	.	.
Alig confidence					.												.							.	.	.	.
Template Conservation
Template Sequence		Q	Q	N	V	P	V	F	L	L	G	D	R	E	K	A	L	A	A	M	D	R	D	L	L	E	L	V	D	E	F	A	W	I	L	E	D	T	A	D	F	I	A	G	R	A	V	A	A	M
Template Known Secondary structure		S	T	T															T		S								S					T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions