 |
Job Description | P63204 | Confidence | 99.70% | Date | Thu Jan 5 12:07:55 GMT 2012 |
Rank | 21 | Aligned Residues | 67 |
% Identity | 16% | Template | c2krfB_ |
PDB info |
PDB header:transcription | Chain: B: PDB Molecule:transcriptional regulatory protein coma; |
PDBTitle: nmr solution structure of the dna binding domain of competence protein2 a
|
Resolution | UNK |
|
 |
  |   |
109 | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | K | N | S | Q | L | C | F | S | H | N | Q | F | K | I | M | Q | L | I | L | K | N | K | N | E | S | N | I | T | S | T | L | N | I | S | Q | Q | T | L | K | I | Q | K | F | N | I | M | Y | K | L | K | L | R | R | M | S | D | I | V | T | L | G | I | T | S | Y | F |
Query Conservation |   |
  |   |   |   |   |   |   |
|
|   |
|
|   |
|
|
|   |
|
|   |   |
|   |
|
|
|
|
|
|   |   |
|   |
|
|   |   |
|
|   |   |
|   |   |   |
|   |   |
|
|   |
|
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|
|   |   |
|   |   |
|
|   |   |   |
|   |
|   |
|   |
|
|
|
|   |   |
|   |
|
|   |   |
|
|   |   |   |   |   |   |
|   |   |
|
|
|
|   |   |   |   |   |
|
|   |   |
|   |   |   |
|
|
Template Sequence |   |
S | Q | K | E | Q | D | V | L | T | P | R | E | C | L | I | L | Q | E | V | E | K | G | F | T | N | Q | E | I | A | D | A | L | H | L | S | K | R | S | I | E | Y | S | L | T | S | I | F | N | K | L | N | V | G | S | R | T | E | A | V | L | I | A | K | S | D | G | V |
Template Known Secondary structure |   |
| S |
| S | S | S | S | S |
|  |  |  |  |  |  |  |  |  |  |  | T | T | S |
|  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
| S | S | S |  |  |  |  |  |  |  |  |  |  | T |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
147 | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|