Job Description P63204 Confidence 99.80% Date Thu Jan 5 12:07:55 GMT 2012 Rank 12 Aligned Residues 162 % Identity 10% Template c2hqrA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:putative transcriptional regulator; PDBTitle: structure of a atypical orphan response regulator protein revealed a2 new phosphorylation-independent regulatory mechanism Resolution UNK

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.			.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.
Predicted Secondary structure																						.	.																			.	.																													.								.	.
Query SS confidence																						.	.																			.	.																													.								.	.
Query Sequence		I	F	L	M	T	K	D	S	F	L	L	Q	G	F	W	Q	L	K	D	N	.	.	H	E	M	I	K	I	N	S	L	S	E	I	K	K	V	G	N	K	.	.	P	F	K	V	I	I	D	T	Y	H	N	H	I	L	D	E	E	A	I	K	F	L	E	K	L	D	A	E	.	R	I	I	V	L	A	P	.	.
Query Conservation																						.	.																			.	.																													.								.	.
Alig confidence																						.	.																			.	.						.	.	.	.																				.								.	.
Template Conservation																																																	.	.	.	.
Template Sequence		V	L	L	I	E	K	N	S	V	L	G	G	E	I	E	K	G	L	N	V	K	G	F	M	A	D	V	T	E	S	L	E	D	G	E	Y	L	M	D	I	R	N	Y	D	L	V	M	.	.	.	.	V	S	D	K	N	A	L	S	F	V	S	R	I	K	E	K	H	S	S	I	V	V	L	V	S	S	D	N	P
Template Known Secondary structure							S													G	G	G	T							S	S									T	T	S			S				.	.	.	.				T	T													T	T	S							S	S
Template Predicted Secondary structure																																																	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.					50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
				75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.																							110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure		.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	Y	H	I	S	K	L	K	A	K	A	P	I	Y	F	V	S	R	K	E	S	I	K	N	L	L	E	I	T	Y	G	K	H	L	P	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	N	S	Q	L	C	F	S	H	N	Q	F	K	I	M	Q	L	I	L	K	N
Query Conservation		.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	S	E	E	E	V	H	A	F	E	Q	G	A	D	D	Y	I	A	K	P	Y	R	S	I	K	A	L	V	A	R	I	E	A	R	L	R	F	W	G	S	N	V	I	E	I	G	D	L	T	I	S	P	D	E	E	K	I	I	Y	K	G	R	E	V	E	V	K	G	K	P	F	E	V	L	T	H	L	A	R	H
Template Known Secondary structure													T		S					T	T		S		T											T	S	S					S				T	T					T	T	T	T					T	T							S	T	T	T									T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
						131	.	.	.	.	.	.	.	.	140						.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.											.	.	.	.	.
Query SS confidence		.	.	.	.											.	.	.	.	.
Query Sequence		.	.	.	.	K	N	E	S	N	I	T	S	T	L	.	.	.	.	.	N	I	S	Q	Q	T	L	K	I	Q	K	F	N	I	M	Y	K	L	K	L	R	R	M	S	D	I	V
Query Conservation		.	.	.	.											.	.	.	.	.
Alig confidence		.	.	.	.											.	.	.	.	.
Template Conservation
Template Sequence		R	D	Q	I	V	S	K	E	Q	L	L	D	A	I	W	E	E	P	E	M	V	T	P	N	V	I	E	V	A	I	N	Q	I	R	Q	K	M	D	K	P	L	G	I	S	T	V
Template Known Secondary structure			S															S	S		S		G	G	G	T														T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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