Return to main results Retrieve Phyre Job Id

Job DescriptionP63204
Confidence54.36%DateThu Jan 5 12:07:55 GMT 2012
Rank446Aligned Residues51
% Identity14%Templatec2cmpA_
PDB info PDB header:terminaseChain: A: PDB Molecule:terminase small subunit; PDBTitle: crystal structure of the dna binding domain of g1p small2 terminase subunit from bacteriophage sf6
Resolution1.58 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   115....120..... ....130.........140.........150.........160.....
Predicted Secondary structure 


.









Query SS confidence 










.







































Query Sequence  CFSHNQFKIMQ. LILKNKNESNITSTLNISQQTLKIQKFNIMYKLKLRRMSD
Query Conservation   

 

 


 .

  
 





  
 

  

  
   
  

 

   
Alig confidence 










.







































Template Conservation 


 

  
  



   


 

  



  

   




    
   
 
Template Sequence  KLSPKQERFIEEYFINDMNATKAAIAAGYSKNSASAIGAENLQKPAIRARID
Template Known Secondary structure 


TTT
TT

TTTS
Template Predicted Secondary structure 












Template SS confidence 



















































   5....10.........20.........30.........40.........50......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions