Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACQ7
Confidence96.47%DateThu Jan 5 11:18:44 GMT 2012
Rank95Aligned Residues72
% Identity21%Templated3deua1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20. . .......30.........40.........50.........60.........70.........80...
Predicted Secondary structure 
..
.










Query SS confidence 













. .
.




























































Query Sequence  KTQHLVVFQEVIRS. . G. SIGSAAKELGLTQPAVSKIINDIEDYFGVELVVRKNTGVTLTPAGQLLLSRSESITREMKN
Query Conservation   
  
  
  
   ..
.
 
 

  
 






  
  

  

  

 
      

  
  
   
         
Alig confidence 













..
.

























.


...



























Template Conservation 
     

  
       
   

  
      

  
  
   .


... 
      
  
                
Template Sequence  TQTHWVTLHNIHQLPPDQSQIQLAKAIGIEQPSLVRTLDQLEDK. GLI. . . SRQKRIKLTEKAEPLIAEMEEVIHKTRG
Template Known Secondary structure 
S
SSTS
T.TS...


GGG
Template Predicted Secondary structure 










.


...




Template SS confidence 














































































   31........40.........50.........60.........70.... ... ..80.........90.........100.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions