Job Description P0ACQ7 Confidence 88.89% Date Thu Jan 5 11:18:44 GMT 2012 Rank 187 Aligned Residues 84 % Identity 18% Template d1ku9a_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain DNA-binding protein Mj223 Resolution 2.80

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		11	.	.	.	.	.	.	.	.	20	.	.				.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.						.	.	.	.	.	60	.	.	.	.	.	.	.				.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.																																	.	.	.	.	.														.	.	.
Query SS confidence														.	.	.																																	.	.	.	.	.														.	.	.
Query Sequence		H	L	V	V	F	Q	E	V	I	R	S	G	.	.	.	S	I	G	S	A	A	K	E	L	G	L	T	Q	P	A	V	S	K	I	I	N	D	I	E	D	Y	F	G	V	E	L	V	.	.	.	.	.	V	R	K	N	T	G	V	T	L	T	P	A	G	.	.	.	Q	L	L	L	S	R	S	E	S	I	T	R
Query Conservation														.	.	.																																	.	.	.	.	.														.	.	.
Alig confidence														.	.	.																											.						.	.	.	.	.														.	.	.
Template Conservation																																											.
Template Sequence		V	G	A	V	Y	A	I	L	Y	L	S	D	K	P	L	T	I	S	D	I	X	E	E	L	K	I	S	K	G	N	V	S	X	S	L	K	K	L	E	E	L	.	G	F	V	R	K	V	W	I	K	G	E	R	K	N	Y	Y	E	A	V	D	G	F	S	S	I	K	D	I	A	K	R	K	H	D	L	I	A	K
Template Known Secondary structure													S	S												T																T	.	T	S							T	T		S	S
Template Predicted Secondary structure																																											.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	M	K	N	M	V	N	E	I	S	G	M	S	S	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	Y	E	D	L	K	K	L	E	E	K	C	N	E	E	E
Template Known Secondary structure													S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions