Job Description P0ACQ7 Confidence 99.58% Date Thu Jan 5 11:18:44 GMT 2012 Rank 27 Aligned Residues 212 % Identity 15% Template c3ho7A_ PDB info PDB header:transcription Chain: A: PDB Molecule:oxyr; PDBTitle: crystal structure of oxyr from porphyromonas gingivalis Resolution 1.58 Å

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		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	E	V	S	F	G	F	P	S	L	I	G	F	T	F	M	S	G	M	I	N	K	F	K	E	V	F	P	K	A	Q	V	S	M	Y	E	A	Q	L	S	S	F	L	P	A	I	R	D	G	R	L	D	F	A	I	G	T	L	S	A	E	M	K	L	Q	D	L	H	V	E	P	L	F	E	S	E	F	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	G	R	L	N	I	A	V	L	P	T	I	A	P	Y	L	L	P	R	V	F	P	I	W	K	K	E	L	A	G	L	E	I	H	V	S	E	M	Q	T	S	R	C	L	A	S	L	L	S	G	E	I	D	M	A	I	I	A	S	K	A	E	T	E	G	L	E	D	D	L	L	Y	Y	E	E	F	L	G	Y	V
Template Known Secondary structure											T	T	T																S	T	T																				T	S		S					S	S					T	T
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.		.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure																																																.																																	.
Query SS confidence																																																.																																	.
Query Sequence		V	A	S	K	S	R	T	C	T	G	T	T	T	L	E	S	L	K	N	E	Q	W	V	L	P	Q	T	N	M	G	Y	Y	S	E	L	L	T	T	L	Q	R	N	G	I	S	I	.	E	N	I	V	K	T	D	S	V	V	T	I	Y	N	L	V	L	N	A	D	F	L	T	V	I	P	C	D	M	T	S	P	.
Query Conservation																																																.																																	.
Alig confidence																																																.																																	.
Template Conservation
Template Sequence		S	R	C	E	P	L	F	E	Q	D	V	I	R	T	T	E	V	N	P	H	R	L	W	L	L	D	E	G	H	C	F	R	D	Q	L	V	R	F	C	Q	M	K	G	L	H	E	R	Q	T	A	Y	S	G	G	S	M	E	A	F	M	R	L	V	E	S	G	Q	G	I	T	F	I	P	Q	L	T	V	E	Q	L
Template Known Secondary structure			T	T	S	G	G	G	G	S	S	S	B		G	G	G			G	G	G	B				T	T	T	T	T	T	T	S	T	T					T		T	T	T	T		S	S	S				S												T	T								G	G	G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	S	N	Q	F	I	T	I	P	V	E	E	T	L	P	V	A	Q	Y	A	A	V	W	S	K	N	Y	R	I	K	K	A	A	S	V	L	V	E	L	A	K	E	Y	S	S	Y	N	G	C	R	R	R	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	P	S	Q	K	E	L	V	R	P	F	G	M	P	R	P	V	R	E	V	R	L	A	V	R	Q	D	Y	S	R	R	K	L	R	E	Q	L	I	G	L	L	R	S	A	V	P	S	D	M	H	K	L	Q	T
Template Known Secondary structure							T	T				B		S	S												T	T		S														T	T	S		G	G	G	G	S			T
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions