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Job DescriptionP0ACQ7
Confidence98.92%DateThu Jan 5 11:18:44 GMT 2012
Rank37Aligned Residues184
% Identity9%Templatec2qsxB_
PDB info PDB header:transcriptionChain: B: PDB Molecule:putative transcriptional regulator, lysr family; PDBTitle: crystal structure of putative transcriptional regulator lysr from2 vibrio parahaemolyticus
Resolution1.64 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   98.100.........110.........120.........130.........140.........150.........160.........170.......
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Query Sequence  EVSFGFPSLIGFTFMSGMINKFKEVFPKAQVSMYEAQLSSFLPAIRDGRLDFAIGTLSAEMKLQDLHVEPLFESEFVLVA
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Template Sequence  LLVVDVTPSFASLWLVPNINDFHQRHPNIRVKILTGD. . . . . . . . . GAVGESDLHVRCLPLSTHYEYSQLLCEETLLLIG
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   17..20.........30.........40.........50... ......60.........70.........80.......
 
   178.180.........190.........200.........210.........220.........230.........240.........250. .....
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Query Sequence  SKSRTCTGTTTLESLKNEQWVLPQTNMGYYSELLTTLQRNGISIENIVKTDSVVTIYNLVLNADFLTVIPCDMT. SPFGS
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Template Sequence  NTNLPKNQAISHYPFI. . . . . . . . . PQTTRPQLWEQFKQENDITYHSVGFEHFYLACEAVRXEKGLALLPDFXAQFSILR
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TTS



GGGGS
B
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BTT
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BT
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   92.......100....... ..110.........120.........130.........140.........150.........160..
 
   257..260.........270.........280.........290.........
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Query Sequence  NQFITIPVEETLPVAQYAAVWSKNYRIKKAASVLVELAKEYSS
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Template Sequence  GDIQHIGNLKLHSGYGYYVVIPNFRLTSRKVALFHDWLKDKLT
Template Known Secondary structure  TS


GGGTT

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   170.........180.........190.........200.........210..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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