Job Description P0ACQ7 Confidence 99.92% Date Thu Jan 5 11:18:44 GMT 2012 Rank 8 Aligned Residues 126 % Identity 19% Template c1b9nA_ PDB info PDB header:transcription Chain: A: PDB Molecule:protein (mode); PDBTitle: regulator from escherichia coli Resolution 2.09 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	Q	H	L	V	V	F	Q	E	V	I	R	S	G	S	I	G	S	A	A	K	E	L	G	L	T	Q	P	A	V	S	K	I	I	N	D	I	E	D	Y	F	G	V	E	L	V	V	R	K	N	T	G	V	T	L	T	P	A	G	Q	L	L	L	S	R	S	E	S	I	T	R	E	M	K	N	M	V	N	E
Query Conservation
Alig confidence																																																			.
Template Conservation																																																			.
Template Sequence		D	P	R	R	I	S	L	L	K	H	I	A	L	S	G	S	I	S	Q	G	A	K	D	A	G	I	S	Y	K	S	A	W	D	A	I	N	E	M	N	Q	L	S	E	H	I	L	V	E	R	.	A	T	G	A	V	L	T	R	Y	G	Q	R	L	I	Q	L	Y	D	L	L	A	Q	I	Q	Q	K	A	F	D	V
Template Known Secondary structure																S	S									T																		T	S						.
Template Predicted Secondary structure																																																			.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.					.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																						.	.	.	.
Query SS confidence																						.	.	.	.
Query Sequence		I	S	G	M	S	S	E	A	V	V	E	V	S	F	G	F	P	S	L	I	.	.	.	.	G	F	T	F	M	S	G	M	I	N	K	F	K	E	V	F	P	K	A	Q	V	S	M	Y	E	A	Q
Query Conservation																						.	.	.	.
Alig confidence																						.	.	.	.
Template Conservation
Template Sequence		L	S	D	D	D	A	L	P	L	N	S	L	L	A	A	I	S	R	F	S	L	Q	T	S	A	R	N	Q	W	F	G	T	I	T	A	R	D	H	D	D	V	Q	Q	H	V	D	V	L	L	A	D
Template Known Secondary structure							S	S		T	T										T				T	T	S											S	S	S	S			S							T	T
Template Predicted Secondary structure
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions