Job Description P00892 Confidence 96.30% Date Thu Jan 5 10:57:00 GMT 2012 Rank 111 Aligned Residues 165 % Identity 16% Template d2ozlb1 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Branched-chain alpha-keto acid dehydrogenase Pyr module Resolution 1.90

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.					.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.																	.									.
Query SS confidence																				.	.	.	.																	.									.
Query Sequence		A	Q	W	V	V	H	A	L	R	A	Q	G	V	N	T	V	F	G	.	.	.	.	Y	P	G	G	A	I	M	P	V	Y	D	A	L	Y	D	G	.	G	V	E	H	L	L	C	R	.	H	E	Q	G	A	A	M	A	A	I	G	Y	A	R	A	T	G	K	T	G	V	C	I	A	T	S	G	P	G	A	T	N
Query Conservation																				.	.	.	.																	.									.
Alig confidence																				.	.	.	.																	.									.															.
Template Conservation																																																																.
Template Sequence		N	Q	G	M	D	E	E	L	E	R	D	E	K	V	F	L	L	G	E	E	V	A	Q	Y	D	G	A	Y	K	V	S	R	G	L	W	K	K	Y	G	D	K	R	I	I	D	T	P	I	S	E	M	G	F	A	G	I	A	V	G	A	A	M	.	A	G	L	R	P	I	C	E	F	M	T	F	N	F	S	M	Q
Template Known Secondary structure													T	T						T	T	S	S	T	T			T	T	S	T	T	T	T							T	T	T						S															.	T	T								S	S	G	G	G	G	G	G
Template Predicted Secondary structure																																																																.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.										.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.																																				.
Query SS confidence											.	.	.	.	.	.	.	.	.																																				.
Query Sequence		L	I	T	G	L	A	D	A	L	.	.	.	.	.	.	.	.	.	L	D	S	I	P	V	V	A	I	T	G	Q	V	S	A	P	F	I	G	T	D	A	F	Q	E	V	D	V	L	G	L	S	L	A	C	.	T	K	H	S	F	L	V	Q	S	L	E	E	L	P	R	I	M	A	E	A	F	D	V	A	C	S
Query Conservation											.	.	.	.	.	.	.	.	.																																				.
Alig confidence											.	.	.	.	.	.	.	.	.																	.	.																		.																							.	.	.	.
Template Conservation																																				.	.																																									.	.	.	.
Template Sequence		A	I	D	Q	V	I	N	S	A	A	K	T	Y	Y	M	S	G	G	L	Q	P	V	P	I	V	F	R	G	P	N	G	A	S	A	.	.	G	V	A	A	Q	H	S	Q	C	F	A	A	W	Y	G	H	C	P	G	L	K	V	V	S	P	W	N	S	E	D	A	K	G	L	I	K	S	A	I	R	.	.	.	.
Template Known Secondary structure		G						T	T	T	T	T					T	T	S	S												S			S	.	.	S			G	G	G										T	S	T	T								S														.	.	.	.
Template Predicted Secondary structure																																				.	.																																									.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.			.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	P	G	P	V	L	V	D	I	P	K	D	I	Q	L	A	S	G	D	L	E	P	W	F	T	T	V	E
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	D	N	N	P	V	V	V	L	E	N	E	L	M	Y	G	V	P	F	E	F	P	P	E	A	Q	S	K	D
Template Known Secondary structure		.	S	S	S												T											S	T	T
Template Predicted Secondary structure		.
Template SS confidence
			163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions