 |
Job Description | P00892 | Confidence | 39.48% | Date | Thu Jan 5 10:57:00 GMT 2012 |
Rank | 209 | Aligned Residues | 103 |
% Identity | 11% | Template | d2i5ea1 |
SCOP info | Nucleotide-diphospho-sugar transferases
| Nucleotide-diphospho-sugar transferases
| MM2497-like
|
Resolution | 2.10 |
|
 |
  |   |
404 | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | F | G | L | P | A | A | V | G | A | Q | V | A | R | P | N | D | T | V | V | C | I | S | G | D | G | S | F | M | M | N | V | Q | E | L | G | T | V | K | R | K | Q | L | P | L | K | I | V | L | L | D | N | Q | R | L | G | M | V | R | Q | W | Q | Q | L | F | F | Q | E | R | Y | S | E | T | T | L | T | D | N | P | D |
Query Conservation |   |
|   |   |   |   |   |
|
|
|
|
|
|
|   |
|   |   |   |
|
|   |
|   |
|
|
|
|
|   |   |   |   |   |
|
|   |
|
|   |   |   |   |   |
|
|   |
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
Template Conservation |   |
  |   |   |
|   |   |
|
|   |   |
|   |   |   |
|   |   |   |
|   |
|
|
|
|
|
|
|   | . |
|   |   |   |   |
|   |   |
|   |   |   |   |   |
|
|
|
|   |
|
|   |
|
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   | . | . | . |   |
Template Sequence |   |
E | K | D | L | N | E | A | L | N | R | Y | L | K | E | A | E | E | P | V | L | I | V | X | A | D | L | P | L | . |
L | S | P | E | H | I | K | E | I | S | S | T | E | K | D | V | C | I | V | P | G | K | G | G | G | T | N | A | L | F | I | K | N | P | S | K | Y | R | V | K | Y | Y | G | S | S | F | L | . |
. |
. |
T |
Template Known Secondary structure |   |
| S |
|  |  |  |  |  |  |  |  |  |  |  |
|
| S |
|  |  |  |  |
| S |
|
| T | T | . |
|
|  |  |  |  |  |  |  | T | T |
| S | S | S |  |  |  |  |  |
| G | G | G |
|  |  |  |  |  |  | S |
| G | G | G |
|
|
|
|
| S | S | S |  |  |  | . | . | . |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
| . |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  | . | . | . |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | |
. | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | |
|
|
. |
  |
  |   |
484 | . | . | . | . | . | 490 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | 500 | . | . | . | . | . | . | . | . | . | 510 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  | . | . | . | . | . | . | . | . | . |  |
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | L | M | L | A | S | A | F | G | I | H | G | Q | H | . |
. |
. |
. |
. |
. |
. |
. |
. |
I | T | R | K | D | Q | V | E | A | A | L | D | T |
Query Conservation |   |
  |   |   |
|
|   |
|   |
|   |   |   |   |   | . | . | . | . | . | . | . | . | . |
|   |   |   |   |
|
|   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|   |
|
|
|   |   |
|   |   |   |
Template Sequence |   |
H | C | S | I | A | T | D | S | G | Q | D | F | E | I | Y | D | S | F | X | A | G | T | D | I | D | E | P | E | D | L | V | E | L | L | I | H |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | T | T |
|
|  |  |  |
|
|
| T | T | T | T |
|
|
|
| S |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
146 | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|