Job Description P00892 Confidence 99.69% Date Thu Jan 5 10:57:00 GMT 2012 Rank 61 Aligned Residues 182 % Identity 12% Template d2c42a2 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) PFOR PP module Resolution 1.78

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		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.								.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.
Query Sequence		R	Y	D	H	P	G	D	A	I	Y	A	P	L	L	L	K	Q	L	S	D	R	K	P	A	D	C	V	V	T	T	D	V	G	Q	H	Q	M	W	A	A	Q	H	I	A	H	T	R	P	E	.	.	.	.	.	.	.	N	F	I	T	S	S	G	L	G	T	M	G	F	G	L	P	A	A	V	G	A	Q	V	A
Query Conservation																																																			.	.	.	.	.	.	.
Alig confidence																																																			.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	F	S	G	A	C	S	G	C	G	E	T	P	Y	V	R	V	I	T	Q	L	F	G	E	R	M	F	I	A	N	A	T	G	C	S	S	I	W	G	A	S	A	P	S	M	P	Y	K	T	N	R	L	G	Q	G	P	A	W	G	N	S	L	F	E	D	A	A	E	Y	G	F	G	M	N	M	S	M	F	A	R
Template Known Secondary structure			S		S			T	T		S	S												G	G	G							S	S									T	T				B				T	T	S										S	T	T
Template Predicted Secondary structure
Template SS confidence
		807	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.
		417																																																																		.	.	420	.	.	.	.	.	.	.	.	.	430
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Query Sequence		R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	N	D	T	V	V	C	I	S	G	D	G	S	.
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation
Template Sequence		R	T	H	L	A	D	L	A	A	K	A	L	E	S	D	A	S	G	D	V	K	E	A	L	Q	G	W	L	A	G	K	N	D	P	I	K	S	K	E	Y	G	D	K	L	K	K	L	L	A	G	Q	K	D	G	L	L	G	Q	I	A	A	M	S	D	L	Y	T	K	K	S	V	W	I	F	G	G	D	G	W	A
Template Known Secondary structure														T	T	T																T	T	S															T	T	T			S								T	T	G	G	G	T	S
Template Predicted Secondary structure
Template SS confidence
		887	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.
		431	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.						.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.		.	.	.				500	.
Predicted Secondary structure																																											.	.	.	.	.																										.				.	.	.
Query SS confidence																																											.	.	.	.	.																										.				.	.	.
Query Sequence		F	M	M	N	V	Q	E	L	G	T	V	K	R	K	Q	L	P	L	K	I	V	L	L	D	N	Q	R	L	G	M	V	R	Q	W	Q	Q	L	F	F	Q	E	.	.	.	.	.	R	Y	S	E	T	T	L	T	D	N	P	D	F	L	M	L	A	S	A	F	G	I	H	G	Q	.	H	I	T	.	.	.	R	K
Query Conservation																																											.	.	.	.	.																										.				.	.	.
Alig confidence																																											.	.	.	.	.																										.				.	.	.
Template Conservation
Template Sequence		Y	D	I	G	Y	G	G	L	D	H	V	L	A	S	G	E	D	V	N	V	F	V	M	D	T	E	V	Y	S	N	T	G	G	Q	S	S	K	A	T	P	T	G	A	V	A	K	F	A	A	A	G	K	R	T	G	K	K	D	L	A	R	M	V	M	T	Y	G	Y	V	Y	V	A	T	V	S	M	G	Y	S	K
Template Known Secondary structure			T	T	T										T	T		S									S	S	B	T	T	T	T		B			T	T	S		T	T			B	B	T	B	T	T			S	S											T	T	S	S	S							T	T	T
Template Predicted Secondary structure
Template SS confidence
		967	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.
		502	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Q	V	E	A	A	L	D	T	M	L	N	S	D	G	P	Y	L	L	H	V	S	I	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	Q	F	L	K	V	L	K	E	A	E	S	F	P	G	P	S	L	V	I	A	Y	A	T
Template Known Secondary structure														S	S	S
Template Predicted Secondary structure
Template SS confidence
		1047	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions