Job Description P00892 Confidence 99.84% Date Thu Jan 5 10:57:00 GMT 2012 Rank 59 Aligned Residues 219 % Identity 12% Template d2c42a1 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) PFOR Pyr module Resolution 1.78

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.												.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	N	G	A	Q	W	V	V	H	A	L	R	A	Q	G	V	N	T	V	F	G	Y	P	G	G	A	I	M	P	V	Y	D	A	L	Y	D	.	.	.	.	.	.	.	.	.	.	.	G	G	V	E	H	L	L	C	R	H	E	Q	G	A	A	M	A	A	I	G	Y	A	R	A	T	G	K	T	G	V	C	I	A
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.																								.	.	.	.	.	.	.	.	.	.	.																												.	.
Template Conservation														.																																																														.	.
Template Sequence		T	D	G	N	T	A	T	A	H	V	A	Y	.	A	M	S	E	V	A	A	I	Y	P	I	T	P	S	S	T	M	G	E	E	A	D	D	W	A	A	Q	G	R	K	N	I	F	G	Q	T	L	T	I	R	E	M	Q	S	E	A	G	A	A	G	A	V	H	G	A	L	A	A	G	A	L	.	.	T	T	T	F
Template Known Secondary structure														.				S								T	T	T														T				T	T	S									S	S														T	T			.	.
Template Predicted Secondary structure														.																																																														.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80			.	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	S	G	P	G	A	T	N	L	I	T	G	L	A	D	A	L	L	D	S	I	P	V	V	A	I	T	G	Q	V	S	A	P	F	I	G	T	D	A	F	Q	E	V	D	V	L	G	L	S	L	A	C	T	K	H	S	F	L	V	Q	S	L	E	E	L	P	R	I	M	A	E	A	F	D	V	A	C	S	G	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	A	S	Q	G	L	L	L	M	I	P	N	M	Y	K	I	S	G	E	L	L	P	G	V	F	H	V	T	A	R	A	I	A	A	H	A	L	S	I	F	G	D	H	Q	D	I	Y	A	A	R	Q	T	G	F	A	M	L	A	S	S	S	V	Q	E	A	H	D	M	A	L	V	A	H	L	A	A	I	E	S	N
Template Known Secondary structure																				T	T														S	S	S				S			S					T	T	T	T	S	S								S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.			.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence		P	G	P	V	L	V	D	I	P	K	D	I	Q	L	A	S	G	D	L	E	P	W	F	T	T	V	E	N	E	V	T	F	P	H	A	E	V	E	Q	A	R	Q	M	L	A	K	A	Q	K	P	M	L	Y	.	.	V	G	G	G	V	G	M	A	Q	A	V	P	A	L	R	E	F	L	A	A	T
Query Conservation																																																							.	.
Alig confidence			.																																																				.	.
Template Conservation			.
Template Sequence		V	.	P	F	M	H	F	F	D	G	F	R	T	S	H	E	I	Q	K	I	E	V	L	D	Y	A	D	M	A	S	L	V	N	Q	K	A	L	A	E	F	R	A	K	S	M	N	P	E	H	P	H	V	R	G	T	A	Q	N	P	D	I	Y	F	Q	G	R	E	A	A	N	P	Y	Y	L	K	V
Template Known Secondary structure			.								T	T	T	T	T	T																T	S												S			T	T	S					S					T	T	T							T	T
Template Predicted Secondary structure			.
Template SS confidence
		165		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions