Job Description P00892 Confidence 38.45% Date Thu Jan 5 10:57:00 GMT 2012 Rank 210 Aligned Residues 322 % Identity 11% Template d1v4va_ SCOP info UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase UDP-N-acetylglucosamine 2-epimerase Resolution 1.80

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		2	.	.	.	.						.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.											.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.									.																																.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.									.																																.	.	.	.	.	.	.	.	.	.
Query Sequence		N	G	A	Q	W	.	.	.	.	.	V	V	H	A	L	R	A	Q	.	G	V	N	T	V	F	G	Y	P	G	G	A	I	M	P	V	Y	D	A	L	Y	D	G	G	V	E	H	L	L	C	R	.	.	.	.	.	.	.	.	.	.	H	E	Q	G	A	A	M	A	A	I	G	Y	A	R	A	T	G	K	T	G
Query Conservation							.	.	.	.	.									.																																.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.									.																																.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	R	P	E	A	T	K	X	A	P	V	Y	L	A	L	R	G	I	P	G	L	K	P	L	V	L	L	T	G	Q	H	R	E	Q	L	R	Q	A	L	S	L	F	G	I	Q	E	D	R	N	L	D	V	X	Q	E	R	Q	A	L	P	D	L	A	A	R	I	L	P	Q	A	A	R	A	L	K	E	X	G	A	D
Template Known Secondary structure		S																T	S	T	T									S	S											T	T	T				S							S	S																						T	T		S
Template Predicted Secondary structure
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	C	I	A	T	S	G	P	G	A	T	N	L	I	T	G	L	A	D	A	L	L	D	S	I	P	V	V	A	I	T	G	Q	V	S	A	P	F	I	G	T	D	A	F	Q	E	V	D	V	L	G	L	S	L	A	C	T	K	H	S	F	L	V	Q	S	L	E	E	L	P	R	I	M	A	E	A	F	D	V	A
Query Conservation
Alig confidence												.	.																																				.																	.	.	.	.	.	.
Template Conservation												.	.																																				.																	.	.	.	.	.	.
Template Sequence		Y	V	L	V	H	G	D	T	L	T	.	.	T	F	A	V	A	W	A	A	F	L	E	G	I	P	V	G	H	V	E	A	G	L	R	S	G	N	L	K	E	P	F	P	E	E	A	.	N	R	R	L	T	D	V	L	T	D	L	D	F	A	P	T	.	.	.	.	.	.	P	L	A	K	A	N	L	L	K	E
Template Known Secondary structure							S	S				.	.											T	T							T						S		T	T	S	S	T	T				.										S					S	S	.	.	.	.	.	.									T	T
Template Predicted Secondary structure												.	.																																				.																	.	.	.	.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.							.	.	.	.	.	160	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.														160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	S	G	R	P	G	P	V	L	V	D	I	P	K	.	.	.	.	.	.	.	.	.	.	.	.	.	D	I	Q	L	A	S	G	D	L	E	P	W	F	T	T	V	E	N	E	V	T	F	P	H	A	E	V	E	Q	A	R	Q	M	L	A	K	A	Q	K	P	M	L	Y	V	G	G	G	V	G	M	A	Q	A
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		G	K	R	E	E	G	I	L	V	T	G	Q	T	G	V	D	A	V	L	L	A	A	K	L	G	R	L	P	E	G	L	P	E	G	P	Y	V	T	V	T	X	H	R	R	E	N	W	P	L	L	S	D	L	A	Q	A	L	K	R	V	A	E	A	F	P	H	L	T	F	V	Y	P	V	H	L	N	.	.	.	.
Template Known Secondary structure		T			G	G	G																							T	T			S	S										G	G	G	G	G	G																T	T	S								S		.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	A	L	R	E	F	L	A	A	T	K	M	P	A	T	C	T	L	K	G	L	G	A	V	E	A	D	Y	P	Y	Y	L	G	M	L	G	M	H	G	T	K	A	A	N	F	A	V	Q	E	C	D	L	L	I	A	V	G	A	R	F	D	D	R	V	T	G	K	L	N	T	F	A	P	H	A	S	V	I	H
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.
Template Sequence		P	V	V	R	E	A	V	F	P	V	L	K	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	N	F	V	L	L	D	P	L	E	Y	G	S	X	A	A	L	X	R	A	S	L	L	L	V	T	D	S	.	.	.	.	.	.	G	G	L	Q	E	E	G	A	A	L	G	V	P	V	V	V
Template Known Secondary structure													T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T																		T							S		.	.	.	.	.	.										T	T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.																	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.							.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		293		.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		M	.	D	I	D	P	A	E	M	N	K	L	R	Q	A	H	V	A	L	Q	G	D	L	N	A	L	L	P	A	L	Q	Q	P	L	N	Q	Y	D	W	Q	Q	H	C	A	Q	L	R	D	E	H	S	W	R	Y	D	H	P	G	D	A	I	Y	A	P	L	L	L	K	Q	L	S	D	R	K
Query Conservation			.
Alig confidence			.																																												.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.
Template Sequence		L	R	N	V	T	E	R	P	E	G	L	K	A	G	I	L	K	L	A	G	T	D	P	E	G	V	Y	R	V	V	K	G	L	L	E	N	P	E	E	L	S	R	X	R	K	.	.	.	.	.	.	.	A	K	N	P	Y	G	D	G	K	A	G	L	X	V	A	R	G	V	A	W	R	L
Template Known Secondary structure			S	S	S		S								T	S						S														T											.	.	.	.	.	.	.	S			S	S			S														T
Template Predicted Secondary structure																																															.	.	.	.	.	.	.
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.								.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions